RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RBM22Q9NW64 420 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CORO2BQ9UQ03 480 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TDRKHQ9Y2W6 561 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 N6AMT1Q9Y5N5 214 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FCHO1O14526 889 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CCR4P51679 360 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 LPIN1Q14693 890 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF846Q147U1 533 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 RBM43Q6ZSC3 357 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 STK40Q8N2I9 435 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 POP5Q969H6 163 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SLC38A2Q96QD8 506 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TMEM121Q9BTD3 319 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TBCDQ9BTW9 1192 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FBXO44Q9H4M3 255 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 NCKAP1Q9Y2A7 1128 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TNPO3Q9Y5L0 923 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SNAP23O00161 211 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 AP3D1O14617 1153 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PRG2P13727 222 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ACLYP53396 1101 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TCHHL1Q5QJ38 904 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC36Q8IYA8 594 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 LRRC17Q8N6Y2 441 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PHF21BQ96EK2 531 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 APOL2Q9BQE5 337 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 MLPHQ9BV36 600 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 JMJD4Q9H9V9 463 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SAR1AQ9NR31 198 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 RPS6KA6Q9UK32 745 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CNTNAP5Q8WYK1 1306 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 HACD1B0YJ81 288 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PTGES3LE9PB15 166 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 BTN3A3O00478 584 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TFRCP02786 760 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 THP07101 528 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC166P0CW27 439 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ALADP13716 330 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 COX7A2P14406 83 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TLX1P31314 330 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 GSSP48637 474 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 NR2C2P49116 596 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FOXO4P98177 505 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 BMPR2Q13873 1038 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CAMK1Q14012 370 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 RGS21Q2M5E4 152 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 MOXD1Q6UVY6 613 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PACS1Q6VY07 963 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 AP3S1Q92572 193 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF512BQ96KM6 892 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FRMD6Q96NE9 622 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZBTB14O43829 449 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 KPNA6O60684 536 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 KHDRBS3O75525 346 aaKnown RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ENDOD1O94919 500 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 MYL9P24844 172 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 YY1P25490 414 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 FIGNQ5HY92 759 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TTC23Q5W5X9 447 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 B3GNT6Q6ZMB0 384 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF621Q6ZSS3 439 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF557Q8N988 423 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TBL1YQ9BQ87 522 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CAB39LQ9H9S4 337 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PRDM16Q9HAZ2 1276 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SAE1Q9UBE0 346 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-205ENST00000461221 OPTCQ9UBM4 332 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ITGA11Q9UKX5 1188 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PSME2Q9UL46 239 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 GSAPA4D1B5 854 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 KPNA5O15131 536 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 RAMP2O60895 175 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ITGA2P17301 1181 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF135P52742 658 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 BNC1Q01954 994 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ACSM2AQ08AH3 577 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CBWD6Q4V339 395 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ACSM2BQ68CK6 577 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CDC42EP5Q6NZY7 148 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CXXC5Q7LFL8 322 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CAMK1DQ8IU85 385 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ARMC8Q8IUR7 673 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 RXFP2Q8WXD0 754 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 DDX18Q9NVP1 670 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 SGTAO43765 313 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CXCR2P25025 360 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 RPL3P39023 403 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 OMPP47874 163 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 TRAP1Q12931 704 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 CBFBQ13951 182 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 FAM131BQ86XD5 332 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms