RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 CCDC112Q8NEF3 446 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 USP33Q8TEY7 942 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 TEKT4Q8WW24 435 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 BHMTQ93088 406 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 TTC17Q96AE7 1141 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 FAF2Q96CS3 445 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 TMA16Q96EY4 203 aaKnown RBP8.42□□□□□ -1.06
SND1-202ENST00000461056 MYO19Q96H55 970 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 MRGPRX3Q96LB0 322 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 PNKPQ96T60 521 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 NELL2Q99435 816 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 DDX50Q9BQ39 737 aaKnown RBP8.42□□□□□ -1.06
SND1-202ENST00000461056 LRFN3Q9BTN0 628 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 PRMT8Q9NR22 394 aaPredicted RBP8.42□□□□□ -1.06
SND1-202ENST00000461056 ARHGEF4Q9NR80 690 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 DNAJC17Q9NVM6 304 aaKnown RBP8.42□□□□□ -1.06
SND1-202ENST00000461056 GPATCH2LQ9NWQ4 482 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 CTTNBP2NLQ9P2B4 639 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 TRIM10Q9UDY6 481 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 OR12D3Q9UGF7 316 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 IP6K2Q9UHH9 426 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 VANGL2Q9ULK5 521 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 USP18Q9UMW8 372 aa8.42□□□□□ -1.06
SND1-202ENST00000461056 MUC22E2RYF6 1773 aaPredicted RBP8.42□□□□□ -1.06
SND1-202ENST00000461056 ZFHX2Q9C0A1 2572 aaPredicted RBP8.41□□□□□ -1.06
SND1-202ENST00000461056 GRID2IPA4D2P6 1211 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 F5H5T6 163 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 MYO1FO00160 1098 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 ADAM23O75077 832 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 CLDN11O75508 207 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 ZMPSTE24O75844 475 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 DCNP07585 359 aaKnown RBP8.41□□□□□ -1.06
SND1-202ENST00000461056 RARAP10276 462 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RHOQP17081 205 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 HTR7P34969 479 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 TNFRSF4P43489 277 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 HCAR3P49019 387 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 DGKGP49619 791 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 CDH4P55283 916 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 KDSRQ06136 332 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 GRSF1Q12849 480 aaKnown RBP eCLIP8.41□□□□□ -1.06
SND1-202ENST00000461056 ANO4Q32M45 955 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 DGKKQ5KSL6 1271 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RABGAP1LQ5R372 815 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 LRRC38Q5VT99 294 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 GRAMD4Q6IC98 578 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 SND1Q7KZF4 910 aaKnown RBP eCLIP8.41□□□□□ -1.063e-12■■□□□ 13.1
SND1-202ENST00000461056 POLNQ7Z5Q5 900 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 ANKS1BQ7Z6G8 1248 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RTL3Q8N8U3 475 aaKnown RBP8.41□□□□□ -1.06
SND1-202ENST00000461056 IL17RCQ8NAC3 791 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 TPCN2Q8NHX9 752 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 DDI1Q8WTU0 396 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 NELL1Q92832 810 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RNF34Q969K3 372 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RPRD1AQ96P16 312 aaPredicted RBP8.41□□□□□ -1.06
SND1-202ENST00000461056 PSMB7Q99436 277 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 IER2Q9BTL4 223 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 C1QTNF1Q9BXJ1 281 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 SIK2Q9H0K1 926 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 GOLPH3Q9H4A6 298 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 RETREG1Q9H6L5 497 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 PCDH18Q9HCL0 1135 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 ABCB8Q9NUT2 735 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 MPP6Q9NZW5 540 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 DEC1Q9P2X7 70 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 SLC12A6Q9UHW9 1150 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 LCMT1Q9UIC8 334 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 GGA2Q9UJY4 613 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 SIT1Q9Y3P8 196 aa8.41□□□□□ -1.06
SND1-202ENST00000461056 A0A1W2PQF6 199 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 ZNF487B1APH4 448 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 K7ESF4 209 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 DCLK1O15075 740 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 RNF40O75150 1001 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 CD160O95971 181 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 CYBBP04839 570 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 CD48P09326 243 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 PABPC1P11940 636 aaKnown RBP8.4□□□□□ -1.06
SND1-202ENST00000461056 MZF1P28698 734 aaPredicted RBP8.4□□□□□ -1.06
SND1-202ENST00000461056 AVPR2P30518 371 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 MAGEA9P43362 315 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 MARCKSL1P49006 195 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 AMPD2Q01433 879 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 MTAPQ13126 283 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 UBXN2BQ14CS0 331 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 EIF4HQ15056 248 aaKnown RBP8.4□□□□□ -1.06
SND1-202ENST00000461056 SPA17Q15506 151 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 PLEKHG6Q3KR16 790 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 ARL13BQ3SXY8 428 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 FBXO43Q4G163 708 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 ATP13A4Q4VNC1 1196 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 BOLA3Q53S33 107 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 PITRM1Q5JRX3 1037 aa8.4□□□□□ -1.06
SND1-202ENST00000461056 EFHC2Q5JST6 749 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms