RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ZNF852Q6ZMS4 543 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 AHI1Q8N157 1196 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CARNMT1Q8N4J0 409 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 ARFGAP1Q8N6T3 406 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 FIBINQ8TAL6 211 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 NSMCE1Q8WV22 266 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 HAUS1Q96CS2 278 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 RSPRY1Q96DX4 576 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 HES6Q96HZ4 224 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 PBKQ96KB5 322 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 PNKPQ96T60 521 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 UHRF1Q96T88 793 aaPredicted RBP11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 C2orf49Q9BVC5 232 aaPredicted RBP11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 BRD8Q9H0E9 1235 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 MAGEH1Q9H213 219 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 CAPN6Q9Y6Q1 641 aa11.34□□□□□ -0.59
SMNDC1-203ENST00000460483 SZT2Q5T011 3432 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ILVBLA1L0T0 632 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ZSCAN5CA6NGD5 496 aaPredicted RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 WASH4PA8MWX3 477 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 CES2O00748 559 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 APODP05090 189 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ASGR2P07307 311 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RHOCP08134 193 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 PRLRP16471 622 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 IL1R2P27930 398 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 HOXC13P31276 330 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 CASQ1P31415 396 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 GJA4P35212 333 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 GRIA2P42262 883 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TAS2R40P59535 323 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ETF1P62495 437 aaKnown RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC20A2Q08357 652 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 SEMA3BQ13214 749 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TUBB2AQ13885 445 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RNF219Q5W0B1 726 aaPredicted RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 NADSYN1Q6IA69 706 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RETSATQ6NUM9 610 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RFWD3Q6PCD5 774 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TRMT11Q7Z4G4 463 aaKnown RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ANKS1BQ7Z6G8 1248 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ZNF354CQ86Y25 554 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RTL3Q8N8U3 475 aaKnown RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RSAD2Q8WXG1 361 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 CD101Q93033 1021 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ACDQ96AP0 544 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 LRRC3BQ96PB8 259 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 CSPG4P5Q96PW8 444 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 NAPGQ99747 312 aaPredicted RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 P2RY13Q9BPV8 354 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TUBB2BQ9BVA1 445 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 FRMD8P1Q9BZ68 369 aaPredicted RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 MUC3BQ9H195 1237 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 HOMER3Q9NSC5 361 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 DNAJC17Q9NVM6 304 aaKnown RBP11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TMEM248Q9NWD8 314 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 TBC1D30Q9Y2I9 924 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
SMNDC1-203ENST00000460483 GOLGA6L7A0A1B0GV03 622 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 SPECC1L-ADORA2AF8WAN1 911 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ARNTLO00327 626 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 KCNK3O14649 394 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 APOL1O14791 398 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ASLP04424 464 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ARSAP15289 507 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 GOT1P17174 413 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 TGM2P21980 687 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC6A4P31645 630 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 PTPN7P35236 360 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ST8SIA6P61647 398 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 DPYSL3Q14195 570 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 LRRC32Q14392 662 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ANKRD20A8PQ5CZ79 823 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 SDE2Q6IQ49 451 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 UMODL1-AS1Q8N2C9 162 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms