RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KCNT1Q5JUK3 1230 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
COL18A1-206ENST00000459895 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 AHI1Q8N157 1196 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 ALLCQ8N6M5 410 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 WFIKKN2Q8TEU8 576 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 USP33Q8TEY7 942 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 SORCS1Q8WY21 1168 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 C1orf74Q96LT6 269 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 CIPCQ9C0C6 399 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 DHX35Q9H5Z1 703 aaKnown RBP13.21□□□□□ -0.29
COL18A1-206ENST00000459895 PRMT8Q9NR22 394 aaPredicted RBP13.21□□□□□ -0.29
COL18A1-206ENST00000459895 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
COL18A1-206ENST00000459895 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
COL18A1-206ENST00000459895 ATG2BQ96BY7 2078 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 DRGXA6NNA5 263 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 NCAM2O15394 837 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ARHGAP6O43182 974 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 CLDN11O75508 207 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 RHOCP08134 193 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 MZF1P28698 734 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 TIE1P35590 1138 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 TPI1P60174 286 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 SATB1Q01826 763 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 EIF4HQ15056 248 aaKnown RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 PLEKHG6Q3KR16 790 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 PREPLQ4J6C6 727 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 PITRM1Q5JRX3 1037 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ACBD5Q5T8D3 534 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ADIPOR2Q86V24 386 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 NLRP14Q86W24 1093 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF513Q8N8E2 541 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 IL17RCQ8NAC3 791 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 DTWD2Q8NBA8 298 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 FIBINQ8TAL6 211 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 HSPH1Q92598 858 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 ACOX2Q99424 681 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 EPAS1Q99814 870 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 SPATA6Q9NWH7 488 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
COL18A1-206ENST00000459895 HYOU1Q9Y4L1 999 aa13.2□□□□□ -0.3
COL18A1-206ENST00000459895 A0A0A0MRY4 1105 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 CHURC1-FNTBB4DL54 471 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 BUB1O43683 1085 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 BUB1BO60566 1050 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 ADAM23O75077 832 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 KLF8O95600 359 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 RARAP10276 462 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 GOT1P17174 413 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 EPHB2P29323 1055 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 L1CAMP32004 1257 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 CTSOP43234 321 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 TNFRSF4P43489 277 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 C11orf63Q6NUN7 778 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 TXNDC5Q8NBS9 432 aaKnown RBP13.19□□□□□ -0.3
COL18A1-206ENST00000459895 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 ACDQ96AP0 544 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 TMEM248Q9NWD8 314 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 CACNA2D2Q9NY47 1150 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 LCMT1Q9UIC8 334 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 MMP17Q9ULZ9 603 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 TBC1D30Q9Y2I9 924 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
COL18A1-206ENST00000459895 PLXND1Q9Y4D7 1925 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 SGK1O00141 431 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 EEF2KO00418 725 aaKnown RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PJA2O43164 708 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 HNRNPLP14866 589 aaKnown RBP eCLIP13.18□□□□□ -0.32e-46■■■■■ 97.6
COL18A1-206ENST00000459895 RHOQP17081 205 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PRKCHP24723 683 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 IL12RB1P42701 662 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 WASP42768 502 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 MAPKAPK2P49137 400 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 KRT83P78385 493 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms