RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TRPC7Q9HCX4 862 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 MAN1C1Q9NR34 630 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 ASAH2Q9NR71 780 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 RAB6BQ9NRW1 208 aa25.08■■□□□ 1.61
U2AF1-204ENST00000459639 F5H5T6 163 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 CCL16O15467 120 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 C5orf22Q49AR2 442 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ANKRD20A2Q5SQ80 823 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 COL13A1Q5TAT6 717 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ANKRD20A1Q5TYW2 823 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ANKRD20A3Q5VUR7 823 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ARHGEF18Q6ZSZ5 1173 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 RELL1Q8IUW5 271 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 SLC22A17Q8WUG5 538 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 IGSF8Q969P0 613 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 TSGA13Q96PP4 275 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 HELZP42694 1942 aaKnown RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 PFKLP17858 780 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 CORO1AP31146 461 aaKnown RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 MAGEA6P43360 314 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 WASHC5Q12768 1159 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 KCNJ11Q14654 390 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ANKRD22Q5VYY1 191 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 TRMT10CQ7L0Y3 403 aaKnown RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 LRRC49Q8IUZ0 686 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 CCDC13Q8IYE1 715 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 UMODL1-AS1Q8N2C9 162 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ZFRQ96KR1 1074 aaKnown RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 RPRD1AQ96P16 312 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-204ENST00000459639 ZIM3Q96PE6 472 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 RETREG1Q9H6L5 497 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 GKN1Q9NS71 199 aa25.07■■□□□ 1.6
U2AF1-204ENST00000459639 FGF19O95750 216 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 LATS1O95835 1130 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 IRAK1P51617 712 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 NDST2P52849 883 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 FAM133BQ5BKY9 247 aaKnown RBP25.06■■□□□ 1.6
U2AF1-204ENST00000459639 TXNDC8Q6A555 127 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 TAB3Q8N5C8 712 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-204ENST00000459639 ATPAF2Q8N5M1 289 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 RUFY1Q96T51 708 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 NDFIP2Q9NV92 336 aa25.06■■□□□ 1.6
U2AF1-204ENST00000459639 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-204ENST00000459639 GOLGA6L7A0A1B0GV03 622 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-204ENST00000459639 DFFAO00273 331 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 TMEM63AO94886 807 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 HNRNPA1P09651 372 aaKnown RBP eCLIP25.05■■□□□ 1.6
U2AF1-204ENST00000459639 HDCP19113 662 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 FDFT1P37268 417 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 PBX2P40425 430 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 EPHA5P54756 1037 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 CYP4F8P98187 520 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 ALFQ53S48 1182 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 LRIG3Q6UXM1 1119 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 DENND1CQ8IV53 801 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 ARL14EPQ8N8R7 260 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-204ENST00000459639 PWWP2AQ96N64 755 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 RBM15Q96T37 977 aaKnown RBP eCLIP25.05■■□□□ 1.6
U2AF1-204ENST00000459639 VAT1Q99536 393 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 GDF15Q99988 308 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 CORO1BQ9BR76 489 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 PBX4Q9BYU1 374 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 SLC39A8Q9C0K1 460 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 EPB41L4BQ9H329 900 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 SEMA4AQ9H3S1 761 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 ETNK1Q9HBU6 452 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 SEPT10Q9P0V9 454 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 DPP7Q9UHL4 492 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 PLAAQ9Y263 795 aa25.05■■□□□ 1.6
U2AF1-204ENST00000459639 AGPSO00116 658 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 CNTN5O94779 1100 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 KLKB1P03952 638 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 EPCAMP16422 314 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 CCNCP24863 283 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 PTPN3P26045 913 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 SLC6A4P31645 630 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 SMAD3P84022 425 aaKnown RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 RAB30Q15771 203 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 PPP1R21Q6ZMI0 780 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 LGI2Q8N0V4 545 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 EXOC4Q96A65 974 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 SLC22A12Q96S37 553 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 DDX50Q9BQ39 737 aaKnown RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 FRMD8Q9BZ67 464 aaPredicted RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 LMAN2LQ9H0V9 348 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 ATXN3LQ9H3M9 355 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 CDC42EP4Q9H3Q1 356 aaKnown RBP25.04■■□□□ 1.6
U2AF1-204ENST00000459639 OGFRQ9NZT2 677 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 ZNF212Q9UDV6 495 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 TCRBV7S3A2A0A539 114 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 KCNK1O00180 336 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 METTL18O95568 372 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 IRF1P10914 325 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 MYL4P12829 197 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 MAPKAPK2P49137 400 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 ARL4CP56559 192 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 SEMA5AQ13591 1074 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 HIF1AQ16665 826 aa25.04■■□□□ 1.6
U2AF1-204ENST00000459639 RABGAP1LQ5R372 815 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms