RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GOT1P17174 413 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ABCB4P21439 1286 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 C5AR1P21730 350 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 PRCPP42785 496 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 RXRGP48443 463 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 RPL34P49207 117 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ARRB1P49407 418 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 RGS7P49802 495 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ADPRHP54922 357 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 LRRC63Q05C16 580 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 FSCBQ5H9T9 825 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 MS4A13Q5J8X5 152 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 PITRM1Q5JRX3 1037 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 SFMBT2Q5VUG0 894 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 TMEM270Q6UE05 265 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 GATAD2AQ86YP4 633 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 MMAAQ8IVH4 418 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 OXR1Q8N573 874 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 AADATQ8N5Z0 425 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 DQX1Q8TE96 717 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 GANCQ8TET4 914 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 CNDP2Q96KP4 475 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 UBL7Q96S82 380 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 FAM129BQ96TA1 746 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 TSG101Q99816 390 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 OMDQ99983 421 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ERVMER34-1Q9H9K5 563 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 RMND1Q9NWS8 449 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 STIM2Q9P246 746 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ARMCX3Q9UH62 379 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ZDHHC9Q9Y397 364 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ASH1LQ9NR48 2969 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 TP53BP1Q12888 1972 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 TTC34A8MYJ7 566 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 TK2O00142 265 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 MOCS3O95396 460 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 LDOC1O95751 146 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ITGAVP06756 1048 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 MZF1P28698 734 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 SLC8A1P32418 973 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CTSOP43234 321 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 FMO5P49326 533 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 PMS1P54277 932 aaKnown RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 NXPH1P58417 271 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ECT2LQ008S8 904 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ILKQ13418 452 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ELAVL3Q14576 367 aaKnown RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 RTP5Q14D33 572 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 MEA1Q16626 185 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CCDC157Q569K6 752 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 DCAF6Q58WW2 860 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ZNF658Q5TYW1 1059 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 ANKRD40Q6AI12 368 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 FBXL19Q6PCT2 694 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 MMS22LQ6ZRQ5 1243 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 KANSL1Q7Z3B3 1105 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CCDC117Q8IWD4 279 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CACTIN-AS1Q8N1I8 211 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CARNMT1Q8N4J0 409 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 SPATA20Q8TB22 786 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 RFFLQ8WZ73 363 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CRELD1Q96HD1 420 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 SERAC1Q96JX3 654 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 GSDMAQ96QA5 445 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 TRIM62Q9BVG3 475 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 NRSN2Q9GZP1 204 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 KDM4CQ9H3R0 1056 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 AASDHPPTQ9NRN7 309 aa10.79□□□□□ -0.68
HDLBP-227ENST00000458564 SETXQ7Z333 2677 aaKnown RBP10.79□□□□□ -0.68
HDLBP-227ENST00000458564 CFAP46Q8IYW2 2715 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 EIF4E1BA6NMX2 242 aaKnown RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 TLR4O00206 839 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 CBX4O00257 560 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PIK3R2O00459 728 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 WNT9AO14904 365 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 P4HA2O15460 535 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 SLC7A4O43246 635 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 IGLV3-25P01717 112 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 JUPP14923 745 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 BRD2P25440 801 aaKnown RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 DRD3P35462 400 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 NUDT1P36639 197 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 EIF2S3P41091 472 aaKnown RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PSMD8P48556 350 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 GCNT1Q02742 428 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 OVGP1Q12889 678 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 LRMPQ12912 555 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 DNAJC3Q13217 504 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PNOCQ13519 176 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 SLC12A1Q13621 1099 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms