RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 BTBD19C9JJ37 291 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 CIB2O75838 187 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 POLBP06746 335 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 PTPN1P18031 435 aaKnown RBP21.17■□□□□ 0.98
CRAT-207ENST00000458362 PTPN3P26045 913 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 IDH3AP50213 366 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 TRMT5Q32P41 509 aaKnown RBP21.17■□□□□ 0.98
CRAT-207ENST00000458362 SPANXN3Q5MJ09 141 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 DPY19L2Q6NUT2 758 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 CLEC20AQ6ZU45 233 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 GPR142Q7Z601 462 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 DCLK2Q8N568 766 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 ATXN7L3BQ96GX2 97 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 SYT15Q9BQS2 421 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 SNX15Q9NRS6 342 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 COPG2Q9UBF2 871 aa21.17■□□□□ 0.98
CRAT-207ENST00000458362 A0A088AWK7 358 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 MBLAC1A4D2B0 266 aaPredicted RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 ZNF195O14628 629 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 DYNC1LI2O43237 492 aaPredicted RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 ACTR3P61158 418 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 SLC25A3Q00325 362 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 KLC1Q07866 573 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 VWA5B1Q5TIE3 1220 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 WSCD1Q658N2 575 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 USP50Q70EL3 339 aaPredicted RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 PLD6Q8N2A8 252 aaKnown RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 SLC25A41Q8N5S1 370 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 TINF2Q9BSI4 451 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 C1orf21Q9H246 121 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 LRRC4Q9HBW1 653 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 KLHL8Q9P2G9 620 aaPredicted RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 CACNG4Q9UBN1 327 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 LRCH1Q9Y2L9 728 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 ANPEPP15144 967 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 ERCC2P18074 760 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 ABCG1P45844 678 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 MRPS35P82673 323 aaKnown RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 CDC42EP1Q00587 391 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 INSCQ1MX18 579 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 SMG8Q8ND04 991 aaKnown RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 NPLOC4Q8TAT6 608 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 SLC7A14Q8TBB6 771 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 KCTD13Q8WZ19 329 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 ZNF669Q96BR6 464 aaPredicted RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 AGAP2Q99490 1192 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 CPNE1Q99829 537 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 TXNDC16Q9P2K2 825 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 STAP1Q9ULZ2 295 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 SORCS3Q9UPU3 1222 aa21.16■□□□□ 0.98
CRAT-207ENST00000458362 APOBEC2Q9Y235 224 aaKnown RBP21.16■□□□□ 0.98
CRAT-207ENST00000458362 SIN3BO75182 1162 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 RALBP11234 206 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 AXLP30530 894 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 ADRA1BP35368 520 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 TKTL1P51854 596 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 MAP3K7CLP57077 242 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 ABCE1P61221 599 aaKnown RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 ITGA9Q13797 1035 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 PCBP1Q15365 356 aaKnown RBP eCLIP21.15■□□□□ 0.98
CRAT-207ENST00000458362 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 GRTP1Q5TC63 336 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 IQSEC1Q6DN90 963 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 IRGCQ6NXR0 463 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 CTU1Q7Z7A3 348 aaKnown RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 SIX6OS1Q8N1H7 587 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 TOP6BLQ8N6T0 577 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 NPWQ8N729 165 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 LENG1Q96BZ8 264 aaPredicted RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 FERMT1Q9BQL6 677 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 MED10Q9BTT4 135 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 OXCT2Q9BYC2 517 aaPredicted RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 ABHD16BQ9H3Z7 469 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 IPPQ9Y573 584 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 ZNF236Q9UL36 1845 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 MAP3K7O43318 606 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 F2P00734 622 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 MAGEA12P43365 314 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 HARS2P49590 506 aaKnown RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 GRB14Q14449 540 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 C1orf146Q5VVC0 180 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 TMEM154Q6P9G4 183 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 TNS4Q8IZW8 715 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 RBBP8Q99708 897 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 ULBP1Q9BZM6 244 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 STN1Q9H668 368 aaKnown RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 WDR6Q9NNW5 1121 aaKnown RBP21.15■□□□□ 0.98
CRAT-207ENST00000458362 DNAJC28Q9NX36 388 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 ANGPTL2Q9UKU9 493 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 SOX13Q9UN79 622 aa21.15■□□□□ 0.98
CRAT-207ENST00000458362 XPOTO43592 962 aaKnown RBP21.14■□□□□ 0.97
CRAT-207ENST00000458362 CPA3P15088 417 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 GRK2P25098 689 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 SEMA3BQ13214 749 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 RALGPS1Q5JS13 557 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 STRA8Q7Z7C7 330 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 OR6Y1Q8NGX8 325 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 PPP4R1Q8TF05 950 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 MS4A4AQ96JQ5 239 aa21.14■□□□□ 0.97
CRAT-207ENST00000458362 SHROOM3Q8TF72 1996 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms