RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 DYDC1Q8WWB3 177 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 LRRC39Q96DD0 335 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 TBC1D31Q96DN5 1066 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 ZNF419Q96HQ0 510 aaPredicted RBP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 KLF6Q99612 283 aaPredicted RBP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 FERMT1Q9BQL6 677 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 EIF2B3Q9NR50 452 aaKnown RBP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 TLR6Q9Y2C9 796 aa16.78■□□□□ 0.28
CAPN13-203ENST00000458085 KIAA0100Q14667 2235 aaKnown RBP16.78■□□□□ 0.28
CAPN13-203ENST00000458085 FAM47DPA6NHR8 397 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 E9PAM4 449 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 H7C4K7 107 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 C2CD2LO14523 706 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 USP12O75317 370 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 SPAG6O75602 509 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 APOEP02649 317 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 KRT4P19013 534 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 ITGB8P26012 769 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 MGAT1P26572 445 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
CAPN13-203ENST00000458085 TUBP50607 506 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 TBX4P57082 545 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 LRRC8BQ6P9F7 803 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 MIB1Q86YT6 1006 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 PPM1NQ8N819 430 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 USP33Q8TEY7 942 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.28
CAPN13-203ENST00000458085 NYNRINQ9P2P1 1898 aaKnown RBP16.77■□□□□ 0.28
CAPN13-203ENST00000458085 ANKRD65E5RJM6 399 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 GOLGA8RI6L899 631 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 EBAG9O00559 213 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 JCHAINP01591 159 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 PRKCHP24723 683 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 STX2P32856 288 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 RPA3P35244 121 aaPredicted RBP16.77■□□□□ 0.27
CAPN13-203ENST00000458085 MLLT6P55198 1093 aaPredicted RBP16.77■□□□□ 0.27
CAPN13-203ENST00000458085 CDK16Q00536 496 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 IKBKEQ14164 716 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 PSMD5Q16401 504 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 TEX44Q53QW1 395 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 CTAGE3PQ8IX95 158 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.27
CAPN13-203ENST00000458085 DENND1AQ8TEH3 1009 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 SMC6Q96SB8 1091 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 MLPHQ9BV36 600 aaPredicted RBP16.77■□□□□ 0.27
CAPN13-203ENST00000458085 SLC39A8Q9C0K1 460 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 TMEM39AQ9NV64 488 aa16.77■□□□□ 0.27
CAPN13-203ENST00000458085 TYROBPO43914 113 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 PARNO95453 639 aaKnown RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 MLNP12872 115 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 NFKB1P19838 968 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 OR1D2P34982 312 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CNKSR3Q6P9H4 555 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CPLX4Q7Z7G2 160 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CNTD1Q8N815 330 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 OR52K1Q8NGK4 314 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CKAP2Q8WWK9 683 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 SPATA17Q96L03 361 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 BRD8Q9H0E9 1235 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 C12orf65Q9H3J6 166 aaKnown RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CCSER2Q9H7U1 834 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 GRID1Q9ULK0 1009 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 VANGL2Q9ULK5 521 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 MAGED2Q9UNF1 606 aaPredicted RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 PCDHA11Q9Y5I1 949 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 PRPF4O43172 522 aaKnown RBP eCLIP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 RTN3O95197 1032 aaPredicted RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 HMBSP08397 361 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CSH1P0DML2 217 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CSH2P0DML3 217 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 SARNPP82979 210 aaKnown RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 SLC1A5Q15758 541 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 CASC4Q6P4E1 433 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
CAPN13-203ENST00000458085 ZNF683Q8IZ20 524 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 GSDMBQ8TAX9 411 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 STAMBPL1Q96FJ0 436 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 SERAC1Q96JX3 654 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 ZMYND15Q9H091 742 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 GBA3Q9H227 469 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 SYBUQ9NX95 663 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 NKIRAS1Q9NYS0 192 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 UBP1Q9NZI7 540 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 DOCK4Q8N1I0 1966 aa16.76■□□□□ 0.27
CAPN13-203ENST00000458085 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 INHBAP08476 426 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
CAPN13-203ENST00000458085 DEFB103AP81534 67 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 SMAD1Q15797 465 aaKnown RBP16.75■□□□□ 0.27
CAPN13-203ENST00000458085 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 MS4A13Q5J8X5 152 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 C10orf120Q5SQS8 335 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 C1orf53Q5VUE5 145 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 KCTD11Q693B1 232 aa16.75■□□□□ 0.27
CAPN13-203ENST00000458085 SLC8B1Q6J4K2 584 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms