RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 GRIA2P42262 883 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 PLK1P53350 603 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 CCINQ13939 588 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 PDK2Q15119 407 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 PON2Q15165 354 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 FSCBQ5H9T9 825 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 CXorf57Q6NSI4 855 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 CIR1Q86X95 450 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 HSPH1Q92598 858 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 FAF2Q96CS3 445 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 ALG14Q96F25 216 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 EPHX3Q9H6B9 360 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 TBC1D17Q9HA65 648 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 LZTFL1Q9NQ48 299 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 CWC15Q9P013 229 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 MRPS17Q9Y2R5 130 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC12-212ENST00000457845 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 C3orf70A6NLC5 250 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZNF487B1APH4 448 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 H0Y626 953 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 K7EQS6 105 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 M0R296 226 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 FGF10O15520 208 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CREB3O43889 395 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 KAT7O95251 611 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 APODP05090 189 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CHRNB1P11230 501 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 GOT1P17174 413 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 KDELR1P24390 212 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 EPHB2P29323 1055 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CD70P32970 193 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 MAPKAPK2P49137 400 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 PEX5P50542 639 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CDH6P55285 790 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 OXCT1P55809 520 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TPI1P60174 286 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 LMAN2Q12907 356 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZNF177Q13360 481 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 DPYSQ14117 519 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TAZQ16635 292 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 FBXO43Q4G163 708 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 TMEM215Q68D42 235 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZNF783Q6ZMS7 281 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 KATNAL2Q8IYT4 538 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 SYNPOQ8N3V7 929 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CARNMT1Q8N4J0 409 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 OR52K2Q8NGK3 314 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 WFIKKN2Q8TEU8 576 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZNF670Q9BS34 389 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CATSPERBQ9H7T0 1116 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 DDX56Q9NY93 547 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 KIAA1522Q9P206 1035 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 INTS6Q9UL03 887 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 MTF2Q9Y483 593 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 PCDHA3Q9Y5H8 950 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 OR51B4Q9Y5P0 310 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 CACNA1IQ9P0X4 2223 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
TRAPPC12-212ENST00000457845 ILVBLA1L0T0 632 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 PRRT4C9JH25 899 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 H3BRJ5 948 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 DCLK1O15075 740 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 PDGFBP01127 241 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 EGFP01133 1207 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 CD48P09326 243 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 PABPC1P11940 636 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 ERCC2P18074 760 aa12.09□□□□□ -0.47
TRAPPC12-212ENST00000457845 OR1E1P30953 314 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms