RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 DCLRE1AQ6PJP8 1040 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 MTDHQ86UE4 582 aaKnown RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 STKLD1Q8NE28 680 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 OR10T2Q8NGX3 314 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 DPF3Q92784 378 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 SLC7A6OSQ96CW6 309 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 ADAM2Q99965 735 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 GBA3Q9H227 469 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 OR12D3Q9UGF7 316 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 INPPL1O15357 1258 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 CYP2C18P33260 490 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 GARSP41250 739 aaKnown RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 TM4SF4P48230 202 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 EIF4EBP2Q13542 120 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 TEX44Q53QW1 395 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 UTP4Q969X6 686 aaKnown RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 E2F7Q96AV8 911 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 SKA1Q96BD8 255 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 MECRQ9BV79 373 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 OSBPL2Q9H1P3 480 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 CASS4Q9NQ75 786 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 LNPEPQ9UIQ6 1025 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 SHROOM3Q8TF72 1996 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 NUP205Q92621 2012 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 A0A0G2JND7 137 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 ARHGEF37A1IGU5 675 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 LRIG2O94898 1065 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 ALDOAP04075 364 aaKnown RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 BPGMP07738 259 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 OCRLQ01968 901 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 ZNF33AQ06730 810 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 CDK18Q07002 472 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 BST1Q10588 318 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 ITPRIPL1Q6GPH6 555 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 DQX1Q8TE96 717 aaKnown RBP17.09■□□□□ 0.33
CCDC43-202ENST00000457422 SUSD3Q96L08 255 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 TMEM120AQ9BXJ8 343 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 LRRC40Q9H9A6 602 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
CCDC43-202ENST00000457422 SNNO75324 88 aaPredicted RBP17.08■□□□□ 0.33
CCDC43-202ENST00000457422 ITGB1P05556 798 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 TYMPP19971 482 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 EPHB2P29323 1055 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 CD68P34810 354 aaPredicted RBP17.08■□□□□ 0.33
CCDC43-202ENST00000457422 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.33
CCDC43-202ENST00000457422 OVOS1Q6IE37 1185 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 TMEM135Q86UB9 458 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.33
CCDC43-202ENST00000457422 LRRTM3Q86VH5 581 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 CERS2Q96G23 380 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 AGAP3Q96P47 875 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 TUBB6Q9BUF5 446 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 SQORQ9Y6N5 450 aa17.08■□□□□ 0.33
CCDC43-202ENST00000457422 F8W810 466 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 ZBTB24O43167 697 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-202ENST00000457422 GLRA3O75311 464 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 YY1P25490 414 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 TMPRSS15P98073 1019 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 ZBTB17Q13105 803 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.32
CCDC43-202ENST00000457422 FAM91A1Q658Y4 838 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 THEM5Q8N1Q8 247 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 PGLYRP2Q96PD5 576 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
CCDC43-202ENST00000457422 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 BFARQ9NZS9 450 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 ZFATQ9P243 1243 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 HEY2Q9UBP5 337 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 NEU3Q9UQ49 428 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 STK38LQ9Y2H1 464 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 RPS6KL1Q9Y6S9 549 aa17.08■□□□□ 0.32
CCDC43-202ENST00000457422 FRMPD3Q5JV73 1810 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 CCDC195A0A1B0GUA6 201 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 USP12O75317 370 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 CBX6O95503 412 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 TOP3BO95985 862 aaKnown RBP17.07■□□□□ 0.32
CCDC43-202ENST00000457422 ITGA2BP08514 1039 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 GP5P40197 560 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 CHI3L2Q15782 390 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 CES3Q6UWW8 571 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 RASSF3Q86WH2 238 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 ZSCAN18Q8TBC5 510 aaPredicted RBP17.07■□□□□ 0.32
CCDC43-202ENST00000457422 TEKT5Q96M29 485 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 CPNE1Q99829 537 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 MLPHQ9BV36 600 aaPredicted RBP17.07■□□□□ 0.32
CCDC43-202ENST00000457422 KCNK4Q9NYG8 393 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 IL1RAPL1Q9NZN1 696 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 VANGL2Q9ULK5 521 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 PSAT1Q9Y617 370 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms