RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TFE3P19532 575 aaPredicted RBP23.88■■□□□ 1.41
CBX3-204ENST00000456948 SDHBP21912 280 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 DPP6P42658 865 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 ECT2LQ008S8 904 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 SPEM2Q0P670 501 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 CCDC14Q49A88 953 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 C5orf22Q49AR2 442 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 FSCBQ5H9T9 825 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 OTUD1Q5VV17 481 aaPredicted RBP23.88■■□□□ 1.41
CBX3-204ENST00000456948 METTL3Q86U44 580 aaKnown RBP23.88■■□□□ 1.41
CBX3-204ENST00000456948 FAM131BQ86XD5 332 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 TMPRSS6Q8IU80 811 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 CPLX3Q8WVH0 158 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 RLN3Q8WXF3 142 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 TRIM11Q96F44 468 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 SIPA1Q96FS4 1042 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 TMEM245Q9H330 911 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 PARVAQ9NVD7 372 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 CAPN11Q9UMQ6 739 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 RALGAPA1Q6GYQ0 2036 aa23.88■■□□□ 1.41
CBX3-204ENST00000456948 EML5Q05BV3 1969 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 TMCO5BA8MYB1 307 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 NDUFS2O75306 463 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 TPM1P09493 284 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 PRKCHP24723 683 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 OXTRP30559 389 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 RFC1P35251 1148 aaPredicted RBP23.87■■□□□ 1.41
CBX3-204ENST00000456948 PBX1P40424 430 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 LMNB2Q03252 620 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 SFSWAPQ12872 951 aaKnown RBP23.87■■□□□ 1.41
CBX3-204ENST00000456948 CSRP2Q16527 193 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 MAP7D1Q3KQU3 841 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 PLEKHG6Q3KR16 790 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 TDRD12Q587J7 1177 aaKnown RBP23.87■■□□□ 1.41
CBX3-204ENST00000456948 PMS2CLQ68D20 193 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 WDR59Q6PJI9 974 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 BNIPLQ7Z465 357 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 OR2T3Q8NH03 318 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 IGSF8Q969P0 613 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 LMLNQ96KR4 655 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 ARRDC1-AS1Q9H2J1 176 aa23.87■■□□□ 1.41
CBX3-204ENST00000456948 ZNF292O60281 2723 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 PRR5-ARHGAP8B1AHC4 643 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 RNASEH1O60930 286 aaKnown RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 SRGAP2O75044 1071 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 RTN2O75298 545 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 DHPSP49366 369 aaPredicted RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 ZNF143P52747 638 aaPredicted RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 PLK1P53350 603 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 ARHGAP8P85298 464 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 CAMK2GQ13555 558 aaPredicted RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 PTPRNQ16849 979 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 TSR1Q2NL82 804 aaKnown RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 C6orf118Q5T5N4 469 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 ZNF571Q7Z3V5 609 aaPredicted RBP23.86■■□□□ 1.41
CBX3-204ENST00000456948 JOSD2Q8TAC2 188 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 FAM172AQ8WUF8 416 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 ERLEC1Q96DZ1 483 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 SYT11Q9BT88 431 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 RETREG1Q9H6L5 497 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 CD248Q9HCU0 757 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 SEMA4GQ9NTN9 838 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 ERVW-1Q9UQF0 538 aa23.86■■□□□ 1.41
CBX3-204ENST00000456948 ITIH6Q6UXX5 1313 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 DRGXA6NNA5 263 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 FTLP02792 175 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 SERPING1P05155 500 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 MYBL1P10243 752 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 HLA-EP13747 358 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 ADRA1BP35368 520 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 ATXN1P54253 815 aaKnown RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 KRT83P78385 493 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 RPL6Q02878 288 aaKnown RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 CREB5Q02930 508 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 C15orf59Q2T9L4 293 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 TRNP1Q6NT89 227 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 C14orf80Q86SX3 495 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 SETD3Q86TU7 594 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 CIR1Q86X95 450 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 ABCA7Q8IZY2 2146 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 C12orf50Q8NA57 414 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 CENPIQ92674 756 aaPredicted RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 MCEEQ96PE7 176 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 CNPY3Q9BT09 278 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.85■■□□□ 1.41
CBX3-204ENST00000456948 ADAM33Q9BZ11 813 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 XPO4Q9C0E2 1151 aaKnown RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 MUC3BQ9H195 1237 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 VPS45Q9NRW7 570 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 SLC25A13Q9UJS0 675 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 INTS6Q9UL03 887 aaKnown RBP23.85■■□□□ 1.41
CBX3-204ENST00000456948 TBC1D30Q9Y2I9 924 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 THADAQ6YHU6 1953 aa23.85■■□□□ 1.41
CBX3-204ENST00000456948 SPTBN4Q9H254 2564 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 TARSL2A2RTX5 802 aaKnown RBP23.84■■□□□ 1.41
CBX3-204ENST00000456948 E9PAM4 449 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 SKILP12757 684 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 RRM1P23921 792 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 ZBTB16Q05516 673 aa23.84■■□□□ 1.41
CBX3-204ENST00000456948 TRIM14Q14142 442 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms