RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 PCDHB4Q9Y5E5 795 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 PCDHGA1Q9Y5H4 931 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 TRIM49BA6NDI0 452 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 LRRC72A6NJI9 287 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 E9PAM4 449 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 ENC1O14682 589 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 BRD2P25440 801 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 DNAJC3Q13217 504 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 CDH18Q13634 790 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 DCAF6Q58WW2 860 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 PITRM1Q5JRX3 1037 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 AADATQ8N5Z0 425 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 DQX1Q8TE96 717 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 TSG101Q99816 390 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 OMDQ99983 421 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 DDX50Q9BQ39 737 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 SCAND2PQ9GZW5 306 aaPredicted RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 AASDHPPTQ9NRN7 309 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 XPO7Q9UIA9 1087 aaKnown RBP12.83□□□□□ -0.35
TRA2B-206ENST00000456380 FZD4Q9ULV1 537 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 NAALADL1Q9UQQ1 740 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 TLR6Q9Y2C9 796 aa12.83□□□□□ -0.35
TRA2B-206ENST00000456380 PLXNA2O75051 1894 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 FBXO21O94952 628 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 ITGAVP06756 1048 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
TRA2B-206ENST00000456380 ABCB4P21439 1286 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 CD38P28907 300 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 FMO5P49326 533 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 CCR5P51681 352 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 ECT2LQ008S8 904 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 APCDD1Q8J025 514 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 ADAM32Q8TC27 787 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 PTPRN2Q92932 1015 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 CNDP2Q96KP4 475 aaKnown RBP12.83□□□□□ -0.36
TRA2B-206ENST00000456380 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
TRA2B-206ENST00000456380 SERPINB11Q96P15 392 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 RMND1Q9NWS8 449 aa12.83□□□□□ -0.36
TRA2B-206ENST00000456380 EDDM13A0A1B0GTR0 161 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 TYW5A2RUC4 315 aaKnown RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 PMM2O15305 246 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 MOCS2O96007 188 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 JUPP14923 745 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 GOT1P17174 413 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 PSMD8P48556 350 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 RPL34P49207 117 aaKnown RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 ADPRHP54922 357 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 BNIP3Q12983 259 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 NNTQ13423 1086 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 STILQ15468 1287 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 FMR1NBQ8N0W7 255 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 PPM1KQ8N3J5 372 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 EID2Q8N6I1 236 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 OR14C36Q8NHC7 312 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 LMO3Q8TAP4 145 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 TSC1Q92574 1164 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 ERCC4Q92889 916 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-206ENST00000456380 SERAC1Q96JX3 654 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 GSDMAQ96QA5 445 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 GDF3Q9NR23 364 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
TRA2B-206ENST00000456380 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
TRA2B-206ENST00000456380 TLR4O00206 839 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 RFPL3O75679 317 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 C1SP09871 688 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 COL5A1P20908 1838 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-206ENST00000456380 C5AR1P21730 350 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 ITPKBP27987 946 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 GPD2P43304 727 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 ACADVLP49748 655 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 NUMBP49757 651 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 STK19P49842 368 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-206ENST00000456380 NXPH1P58417 271 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.368e-10■□□□□ 9.3
TRA2B-206ENST00000456380 TAC4Q86UU9 113 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 CCDC117Q8IWD4 279 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-206ENST00000456380 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 CCDC34Q96HJ3 373 aa12.81□□□□□ -0.36
TRA2B-206ENST00000456380 ARID1BQ8NFD5 2236 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-206ENST00000456380 EIF4E1BA6NMX2 242 aaKnown RBP12.8□□□□□ -0.36
TRA2B-206ENST00000456380 LATO43561 262 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 MOCS3O95396 460 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 ADH1BP00325 375 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 IL1BP01584 269 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 CDK4P11802 303 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 VAV1P15498 845 aa12.8□□□□□ -0.36
TRA2B-206ENST00000456380 MZF1P28698 734 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms