RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 POLMQ9NP87 494 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-205ENST00000454542 PPARGC1AQ9UBK2 798 aaKnown RBP14.61□□□□□ -0.07
HDAC4-205ENST00000454542 TBC1D30Q9Y2I9 924 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 SNX10Q9Y5X0 201 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 STON1Q9Y6Q2 735 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 ANKRD62A6NC57 917 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 E9PAM4 449 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 CNTN5O94779 1100 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ASLP04424 464 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 TPM1P09493 284 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 DLDP09622 509 aaKnown RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 PRKCHP24723 683 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ADRA1BP35368 520 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 EIF4A3P38919 411 aaKnown RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 CSKP41240 450 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 PXNP49023 591 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ZNF75DP51815 510 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 AIF1P55008 147 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 OXCT1P55809 520 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 SLC18A3Q16572 532 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ARL13BQ3SXY8 428 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ALFQ53S48 1182 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 HEATR6Q6AI08 1181 aaKnown RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 KIAA1211LQ6NV74 962 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ALKBH5Q6P6C2 394 aaKnown RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 DCUN1D2Q6PH85 259 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ASCL5Q7RTU5 278 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 TMC6Q7Z403 805 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 KDM1BQ8NB78 822 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 OR52K2Q8NGK3 314 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 GAB3Q8WWW8 586 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 ATRIPQ8WXE1 791 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 SORCS1Q8WY21 1168 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 NKD2Q969F2 451 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 MRGPRX3Q96LB0 322 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 TRIM7Q9C029 511 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 CIPCQ9C0C6 399 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 SIK2Q9H0K1 926 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 KIAA1522Q9P206 1035 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 SMG5Q9UPR3 1016 aaKnown RBP14.6□□□□□ -0.07
HDAC4-205ENST00000454542 OR51B4Q9Y5P0 310 aa14.6□□□□□ -0.07
HDAC4-205ENST00000454542 PIEZO1Q92508 2521 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 TCRBV21S2A2A0A5A6 115 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 H0Y626 953 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 HRO43593 1189 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 CYP1A2P05177 515 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 GABRG2P18507 467 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-205ENST00000454542 WASP42768 502 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 SEMA3BQ13214 749 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 ANO7Q6IWH7 933 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 CYP4V2Q6ZWL3 525 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-205ENST00000454542 ARFGAP1Q8N6T3 406 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 TC2NQ8N9U0 490 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 CYB5D2Q8WUJ1 264 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.59□□□□□ -0.07
HDAC4-205ENST00000454542 THAP2Q9H0W7 228 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 RETREG1Q9H6L5 497 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 MRPL47Q9HD33 250 aaKnown RBP14.59□□□□□ -0.07
HDAC4-205ENST00000454542 RAD54BQ9Y620 910 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 TNRC6BQ9UPQ9 1833 aaKnown RBP14.59□□□□□ -0.07
HDAC4-205ENST00000454542 OTOGLQ3ZCN5 2332 aa14.59□□□□□ -0.07
HDAC4-205ENST00000454542 WASH3PC4AMC7 463 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 AKR1B15C9JRZ8 316 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FAM72CH0Y354 149 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 ALDH1A2O94788 518 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 LMNAP02545 664 aaKnown RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 POLR2EP19388 210 aaKnown RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 NDUFV2P19404 249 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FECHP22830 423 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 PSMA2P25787 234 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 MZF1P28698 734 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 MRE11P49959 708 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 GFPT1Q06210 699 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 SRSF5Q13243 272 aaKnown RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 CAMK2GQ13555 558 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FAM72AQ5TYM5 149 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 SDE2Q6IQ49 451 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FAM72DQ6L9T8 149 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 LRRC31Q6UY01 552 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 SETD3Q86TU7 594 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 NLRP14Q86W24 1093 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FAM72BQ86X60 149 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 CCDC117Q8IWD4 279 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-205ENST00000454542 APCDD1Q8J025 514 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 ARHGEF26Q96DR7 871 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 ZYG11BQ9C0D3 744 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 FZD10Q9ULW2 581 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 GPR179Q6PRD1 2367 aa14.58□□□□□ -0.08
HDAC4-205ENST00000454542 SPAG17Q6Q759 2223 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 LRCH4O75427 683 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 RPP40O75818 363 aaKnown RBP14.57□□□□□ -0.08
HDAC4-205ENST00000454542 LRIG2O94898 1065 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 MOCS3O95396 460 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 SRPRAP08240 638 aaKnown RBP14.57□□□□□ -0.08
HDAC4-205ENST00000454542 L1CAMP32004 1257 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms