RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CYP4V2Q6ZWL3 525 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-213ENST00000454468 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.45
SMPD4-213ENST00000454468 PPCSQ9HAB8 311 aa12.27□□□□□ -0.45
SMPD4-213ENST00000454468 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
SMPD4-213ENST00000454468 C9IYK1 514 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 LRIG2O94898 1065 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 GJA9P57773 515 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 RCN1Q15293 331 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PPFIBP2Q8ND30 876 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 C10orf82Q8WW14 230 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SIGLEC10Q96LC7 697 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SMOQ99835 787 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 OMDQ99983 421 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 FICDQ9BVA6 458 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 COLEC11Q9BWP8 271 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PNPOQ9NVS9 261 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 FZD10Q9ULW2 581 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
SMPD4-213ENST00000454468 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
SMPD4-213ENST00000454468 TADA2AO75478 443 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 ODC1P11926 461 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 ELF1P32519 619 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PTPN9P43378 593 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PLK1P53350 603 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
SMPD4-213ENST00000454468 ARHGAP17Q68EM7 881 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SLC9A4Q6AI14 798 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SUGP1Q8IWZ8 645 aaKnown RBP12.26□□□□□ -0.45
SMPD4-213ENST00000454468 CRYBG2Q8N1P7 616 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 FAM13CQ8NE31 585 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 WWP1Q9H0M0 922 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PLLPQ9Y342 182 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 SH3BP1Q9Y3L3 701 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 PCDHA11Q9Y5I1 949 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 TRPV2Q9Y5S1 764 aa12.26□□□□□ -0.45
SMPD4-213ENST00000454468 ATP5HO75947 161 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ITGA2BP08514 1039 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 LHX1P48742 406 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MGAT5BQ3V5L5 792 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 SPOUT1Q5T280 376 aaKnown RBP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ISLR2Q6UXK2 745 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 PACS1Q6VY07 963 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 C10orf107Q8IVU9 208 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MTG1Q9BT17 334 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 RBM22Q9NW64 420 aaKnown RBP eCLIP12.25□□□□□ -0.456e-9■■■■■ 36.5
SMPD4-213ENST00000454468 A0A096LPK6 155 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 OPHN1O60890 802 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ASGR1P07306 291 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 PIRTP0C851 137 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MX2P20592 715 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 AXLP30530 894 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 CRHR2Q13324 411 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 CUL3Q13618 768 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ZNF460Q14592 562 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ARHGAP36Q6ZRI8 547 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 RELL1Q8IUW5 271 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 RNF148Q8N7C7 305 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 CERS2Q96G23 380 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 KLHL5Q96PQ7 755 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 QKIQ96PU8 341 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 GTSE1Q9NYZ3 720 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 BRCA2P51587 3418 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
SMPD4-213ENST00000454468 GPR182O15218 404 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MGRN1O60291 552 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 PDE5AO76074 875 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ENDOD1O94919 500 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 RALBP11234 206 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 ALADP13716 330 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 GRK4P32298 578 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 SOX11P35716 441 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 CXCR3P49682 368 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 SERPINB9P50453 376 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 TUBP50607 506 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 CDK16Q00536 496 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MPP3Q13368 585 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 NOMO2Q5JPE7 1267 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 UBXN11Q5T124 520 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 MARK4Q96L34 752 aa12.25□□□□□ -0.45
SMPD4-213ENST00000454468 AIM2O14862 343 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ITM2AO43736 263 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 ITGB1P05556 798 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 TCN1P20061 433 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 PTPN4P29074 926 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 SPRP35270 261 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-213ENST00000454468 SERPINB5P36952 375 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 SLC1A6P48664 564 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 DAOAP59103 153 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 SLC25A3Q00325 362 aa12.24□□□□□ -0.45
SMPD4-213ENST00000454468 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms