RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 PCDHGA12O60330 932 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 LUC7L3O95232 432 aaKnown RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 APOEP02649 317 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 KRT5P13647 590 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 STK19P49842 368 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 GALCP54803 685 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 RACK1P63244 317 aaKnown RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 DCAF6Q58WW2 860 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 RAP1GAP2Q684P5 730 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 DHRS13Q6UX07 377 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 LGI2Q8N0V4 545 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 GALNT15Q8N3T1 639 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 SPATA20Q8TB22 786 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 RPL10LQ96L21 214 aaKnown RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 OMDQ99983 421 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-210ENST00000453030 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 CTNND2Q9UQB3 1225 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 ERVW-1Q9UQF0 538 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 TLR6Q9Y2C9 796 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 EDDM13A0A1B0GTR0 161 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 LRRC72A6NJI9 287 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 CAPN9O14815 690 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 VILLO15195 856 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 MOCS3O95396 460 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 WNT1P04628 370 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 SLC8A1P32418 973 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 CLDN6P56747 220 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 CYP4F3Q08477 520 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 CETN1Q12798 172 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 NNTQ13423 1086 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 C9orf64Q5T6V5 341 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 SYPL2Q5VXT5 272 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 APCDD1Q8J025 514 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 STK40Q8N2I9 435 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 AADATQ8N5Z0 425 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 LMO3Q8TAP4 145 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 SLC39A13Q96H72 371 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 LRIG1Q96JA1 1093 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 KREMEN1Q96MU8 473 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 EBF2Q9HAK2 575 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 TJP2Q9UDY2 1190 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
GARNL3-210ENST00000453030 MAN1B1Q9UKM7 699 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 ITIH6Q6UXX5 1313 aa12.08□□□□□ -0.48
GARNL3-210ENST00000453030 E5RJQ4 531 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 WNT9AO14904 365 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 PMM2O15305 246 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SART1O43290 800 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 IL1BP01584 269 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 VAV1P15498 845 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 ABCB4P21439 1286 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 TACR2P21452 398 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 GPD2P43304 727 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 ADPRHP54922 357 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 PPP2CBP62714 309 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 PPP2CAP67775 309 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 PITX1P78337 314 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 ECT2LQ008S8 904 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 GCNT1Q02742 428 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SFSWAPQ12872 951 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SMAD1Q15797 465 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 ZC3H12AQ5D1E8 599 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 TTI2Q6NXR4 508 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 OR2T34Q8NGX1 318 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 OR14C36Q8NHC7 312 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 NELFBQ8WX92 580 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 ELF4Q99607 663 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 INTS2Q9H0H0 1204 aaKnown RBP12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SLCO3A1Q9UIG8 710 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 FZD4Q9ULV1 537 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
GARNL3-210ENST00000453030 SYNJ2BP-COX16A0A087WUM0 186 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 F5H5T6 163 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 PLK4O00444 970 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ENC1O14682 589 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 P4HA2O15460 535 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 PAPSS1O43252 624 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 THAP12O43422 761 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 DFNA5O60443 496 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 LETM1O95202 739 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ADH1BP00325 375 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms