RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SMAD1Q15797 465 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 CCDC40Q4G0X9 1142 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 CLEC4CQ8WTT0 213 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 SLC39A13Q96H72 371 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 MRGPRX3Q96LB0 322 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 TIGD1Q96MW7 591 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 FBXL12Q9NXK8 326 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 STIM2Q9P246 746 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 FTSJ1Q9UET6 329 aa11.28□□□□□ -0.6
USP1-204ENST00000452143 INTS6Q9UL03 887 aaKnown RBP11.28□□□□□ -0.6
USP1-204ENST00000452143 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.6
USP1-204ENST00000452143 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 EDDM13A0A1B0GTR0 161 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 C10orf142B7Z368 130 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 E9PAM4 449 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 H0Y8X5 98 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 RNF225M0QZC1 329 aaPredicted RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 MID1O15344 667 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 YKT6O15498 198 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 LUC7L3O95232 432 aaKnown RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 ADH1BP00325 375 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 APOEP02649 317 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 FYNP06241 537 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 CDK4P11802 303 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 GALCP54803 685 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 SLC12A1Q13621 1099 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 ELAVL3Q14576 367 aaKnown RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 C9orf64Q5T6V5 341 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 RNF219Q5W0B1 726 aaPredicted RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 TAC4Q86UU9 113 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 DHX40Q8IX18 779 aaKnown RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 OR2T34Q8NGX1 318 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 LMO3Q8TAP4 145 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 MDM1Q8TC05 714 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 GANCQ8TET4 914 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 STK32AQ8WU08 396 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 KAT5Q92993 513 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 FAM149B1Q96BN6 582 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 SLC6A18Q96N87 628 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 ELF4Q99607 663 aaPredicted RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 OMDQ99983 421 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 MIS12Q9H081 205 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
USP1-204ENST00000452143 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 CNTN6Q9UQ52 1028 aa11.27□□□□□ -0.61
USP1-204ENST00000452143 KALRNO60229 2985 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 A0A1W2PP55 124 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 CAPN9O14815 690 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 RNASEH2AO75792 299 aaKnown RBP11.26□□□□□ -0.61
USP1-204ENST00000452143 GNA14O95837 355 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 C5AR1P21730 350 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 GPD2P43304 727 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 CCR5P51681 352 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 ECT2LQ008S8 904 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 DCAF6Q58WW2 860 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 FSCBQ5H9T9 825 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 TTC39BQ5VTQ0 682 aaPredicted RBP11.26□□□□□ -0.61
USP1-204ENST00000452143 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 NCEH1Q6PIU2 408 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 PDZD3Q86UT5 571 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
USP1-204ENST00000452143 MYEOVQ96EZ4 313 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 BTN2A3PQ96KV6 586 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 MTG2Q9H4K7 406 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 POPDC2Q9HBU9 364 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 ST7Q9NRC1 585 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 ERVW-1Q9UQF0 538 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 NAALADL1Q9UQQ1 740 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 RAXQ9Y2V3 346 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 CEP83Q9Y592 693 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 PCDHGA1Q9Y5H4 931 aa11.26□□□□□ -0.61
USP1-204ENST00000452143 FAM47DPA6NHR8 397 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 GOLGA8CPA6NN73 597 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MED7O43513 233 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MOCS2O96007 188 aaPredicted RBP11.25□□□□□ -0.61
USP1-204ENST00000452143 IGLV3-25P01717 112 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 CD38P28907 300 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 SLC8A1P32418 973 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 HNF1BP35680 557 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 NNMTP40261 264 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 PSMD8P48556 350 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 ARRB1P49407 418 aaPredicted RBP11.25□□□□□ -0.61
USP1-204ENST00000452143 ADPRHP54922 357 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 OXCT1P55809 520 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
USP1-204ENST00000452143 SULT2A1Q06520 285 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 MTA1Q13330 715 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 COL28A1Q2UY09 1125 aa11.25□□□□□ -0.61
USP1-204ENST00000452143 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms