RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BNIP3LO60238 219 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 SIN3BO75182 1162 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 PAGE1O75459 146 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ADCY5O95622 1261 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 SLC2A3P11169 496 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ZNF18P17022 549 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 MZF1P28698 734 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 FLT3P36888 993 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 STAT1P42224 750 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 PSMD8P48556 350 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ATXN3P54252 364 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 JAM2P57087 298 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ATP11AP98196 1134 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 FMO1Q01740 532 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 AUHQ13825 339 aaKnown RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 PLEKHG6Q3KR16 790 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 TRNP1Q6NT89 227 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 PSAPL1Q6NUJ1 521 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 FBXL22Q6P050 247 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 SND1Q7KZF4 910 aaKnown RBP eCLIP9.99□□□□□ -0.81
USP54-207ENST00000451492 C14orf80Q86SX3 495 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ZDHHC17Q8IUH5 632 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ZCCHC9Q8N567 271 aaKnown RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 ZNF557Q8N988 423 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 ZNF397Q8NF99 534 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 MYO19Q96H55 970 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 LMLNQ96KR4 655 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 NPY6RQ99463 290 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 PRMT1Q99873 361 aaKnown RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 WDCPQ9H6R7 721 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 PRSS16Q9NQE7 514 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ANLNQ9NQW6 1124 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 ITM2CQ9NQX7 267 aa9.99□□□□□ -0.81
USP54-207ENST00000451492 KIAA1522Q9P206 1035 aaPredicted RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 LIMA1Q9UHB6 759 aaKnown RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 NOCTQ9UK39 431 aaKnown RBP9.99□□□□□ -0.81
USP54-207ENST00000451492 A0A1B0GVM2 712 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 TCAF2A6NFQ2 919 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 CDX4O14627 284 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 GIPC1O14908 333 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 CNTN5O94779 1100 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 LSM8O95777 96 aaKnown RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 ASLP04424 464 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 VAV1P15498 845 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 CHRNB2P17787 502 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 ACSL1P33121 698 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 CDH5P33151 784 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 GABRB2P47870 512 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 NOVA1P51513 510 aaKnown RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 LIMK1P53667 647 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 RPS14P62263 151 aaKnown RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 ECT2LQ008S8 904 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 CDR2Q01850 454 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 NCAPHQ15003 741 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 DUOXA1Q1HG43 343 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 C15orf59Q2T9L4 293 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 TTC31Q49AM3 519 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 RAB6CQ53S08 254 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 SPDYCQ5MJ68 293 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 WDR45BQ5MNZ6 344 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 SYCP2LQ5T4T6 812 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 TTC39BQ5VTQ0 682 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 SLC23A3Q6PIS1 610 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 TFAP2DQ7Z6R9 452 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 FAM131BQ86XD5 332 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 MMAAQ8IVH4 418 aaKnown RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 OR52K2Q8NGK3 314 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 FOXJ1Q92949 421 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 TTC17Q96AE7 1141 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 MRGPRX3Q96LB0 322 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 IRX2Q9BZI1 471 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 RAB6CQ9H0N0 254 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 MUC3BQ9H195 1237 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 HSD3B7Q9H2F3 369 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 C6orf106Q9H6K1 298 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 SUN2Q9UH99 717 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 EVLQ9UI08 416 aaPredicted RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 EIF2B4Q9UI10 523 aaKnown RBP9.98□□□□□ -0.81
USP54-207ENST00000451492 SLCO3A1Q9UIG8 710 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 SLC25A13Q9UJS0 675 aa9.98□□□□□ -0.81
USP54-207ENST00000451492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 A0A1W2PP55 124 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 I6L893 689 aaPredicted RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 MID1O15344 667 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 TEX33O43247 280 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 RNASEH1O60930 286 aaKnown RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 RNASEH2AO75792 299 aaKnown RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 FSBPO95073 299 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 RHOCP08134 193 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 OXTRP30559 389 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 DPP6P42658 865 aa9.97□□□□□ -0.81
USP54-207ENST00000451492 NSFP46459 744 aaKnown RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 GFPT1Q06210 699 aaPredicted RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 ZNF177Q13360 481 aaPredicted RBP9.97□□□□□ -0.81
USP54-207ENST00000451492 HNRNPA1L2Q32P51 320 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms