RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 DEUP1Q05D60 604 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 NME3Q13232 169 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 GALNTL6Q49A17 601 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TEX44Q53QW1 395 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 SCYL2Q6P3W7 929 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 SPRED2Q7Z698 418 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TMEM135Q86UB9 458 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 NPAS4Q8IUM7 802 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TAB3Q8N5C8 712 aaPredicted RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 C1orf74Q96LT6 269 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TMEM175Q9BSA9 504 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 RABEP2Q9H5N1 569 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 KCNK13Q9HB14 408 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 MKS1Q9NXB0 559 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 NUDT5Q9UKK9 219 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TLR6Q9Y2C9 796 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 MRPL42Q9Y6G3 142 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 PAGE1O75459 146 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 CNTN5O94779 1100 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 KLKB1P03952 638 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 GABRB3P28472 473 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 HPDP32754 393 aaPredicted RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 PPP2R5DQ14738 602 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 STAT4Q14765 748 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ALG1LQ6GMV1 187 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 FUT10Q6P4F1 479 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 LRRC8BQ6P9F7 803 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 DENND5BQ6ZUT9 1274 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 CCDC25Q86WR0 208 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 BBOF1Q8ND07 529 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PAFAH2Q99487 392 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 IL1RAPL1Q9NZN1 696 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PAK5Q9P286 719 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 MTRF1LQ9UGC7 380 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 OR12D3Q9UGF7 316 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 CHMP2BQ9UQN3 213 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TRIM17Q9Y577 477 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ARCN1P48444 511 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 CRADDP78560 199 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 RNASELQ05823 741 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 CALCOCO2Q13137 446 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TFDP2Q14188 446 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ZNF365Q70YC5 407 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 CCT6BQ92526 530 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 TOP1MTQ969P6 601 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 LMLNQ96KR4 655 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 SLC39A8Q9C0K1 460 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 GBA3Q9H227 469 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 RAB6BQ9NRW1 208 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PIH1D1Q9NWS0 290 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 SLC17A7Q9P2U7 560 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 STOML2Q9UJZ1 356 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 OLFM2O95897 454 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PSMA3P25788 255 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 IFNAR2P48551 515 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 DARS2Q6PI48 645 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 KDELC1Q6UW63 502 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 PCGF5Q86SE9 256 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 LRRC34Q8IZ02 419 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 APBB2Q92870 758 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ARHGEF2Q92974 986 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 EBNA1BP2Q99848 306 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 DDIT4Q9NX09 232 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 SLC24A2Q9UI40 661 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 GGA2Q9UJY4 613 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 RAD54BQ9Y620 910 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 CDH16O75309 829 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 PAPLNO95428 1278 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 F11P03951 625 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 HOXD10P28358 340 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 CTC1Q2NKJ3 1217 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 GLIPR1L2Q4G1C9 344 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 RIBC1Q8N443 379 aaPredicted RBP6.76□□□□□ -1.33
USP46-202ENST00000451218 TFB1MQ8WVM0 346 aaKnown RBP6.76□□□□□ -1.33
USP46-202ENST00000451218 MYRFLQ96LU7 910 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 SEZ6LQ9BYH1 1024 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 SYBUQ9NX95 663 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 PPARGC1AQ9UBK2 798 aaKnown RBP6.76□□□□□ -1.33
USP46-202ENST00000451218 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 PCDHA11Q9Y5I1 949 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 MYOFQ9NZM1 2061 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 CFAP69A5D8W1 941 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 ERICH4A6NGS2 130 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 A6NNZ2 444 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 E9PAM4 449 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 IFNB1P01574 187 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 MLNP12872 115 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 ZNF33AQ06730 810 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 KRT81Q14533 505 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 C3orf62Q6ZUJ4 267 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 CLEC14AQ86T13 490 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 FAM217AQ8IXS0 508 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 RNF38Q9H0F5 515 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
USP46-202ENST00000451218 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms