RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 DNAI2Q9GZS0 605 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 PABPC3Q9H361 631 aaKnown RBP10.54□□□□□ -0.72
LINC01004-202ENST00000450686 ACP6Q9NPH0 428 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 ABCC13Q9NSE7 274 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 FBXL12Q9NXK8 326 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 STOML2Q9UJZ1 356 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 COQ4Q9Y3A0 265 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 MGAQ8IWI9 3026 aa10.54□□□□□ -0.72
LINC01004-202ENST00000450686 ARID1BQ8NFD5 2236 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 FAM170AA1A519 330 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TIMM44O43615 452 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 RNASEH2AO75792 299 aaKnown RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 DKK1O94907 266 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 ZIC2O95409 532 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 LTFP02788 710 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 SETSIPP0DME0 302 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 CD27P26842 260 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 FMO5P49326 533 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 CCT8P50990 548 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TEAD4Q15561 434 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 POM121L1PQ3SYA9 428 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TTC31Q49AM3 519 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 DCAF6Q58WW2 860 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 RAP1GAP2Q684P5 730 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 KIAA0895LQ68EN5 471 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 KLHL10Q6JEL2 608 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 DENND1BQ6P3S1 775 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 LCLAT1Q6UWP7 414 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 DBX2Q6ZNG2 339 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TAC4Q86UU9 113 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 FMR1NBQ8N0W7 255 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 AADATQ8N5Z0 425 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 HJURPQ8NCD3 748 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 SLC35F5Q8WV83 523 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 KCTD13Q8WZ19 329 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 RPL10LQ96L21 214 aaKnown RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TSG101Q99816 390 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 RSPH9Q9H1X1 276 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 NEUROG2Q9H2A3 272 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 CNGB3Q9NQW8 809 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 TJP2Q9UDY2 1190 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 ARMCX3Q9UH62 379 aaPredicted RBP10.53□□□□□ -0.72
LINC01004-202ENST00000450686 SLCO3A1Q9UIG8 710 aa10.53□□□□□ -0.72
LINC01004-202ENST00000450686 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 ATP5BP06576 529 aaKnown RBP10.52□□□□□ -0.73
LINC01004-202ENST00000450686 GGCXP38435 758 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 GRK6P43250 576 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 GRIA4P48058 902 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 SLC11A2P49281 568 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 IRAK1P51617 712 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 GALCP54803 685 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 PPP2CBP62714 309 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 PPP2CAP67775 309 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 SHBQ15464 509 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 TAF5Q15542 800 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 CST6Q15828 149 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 HNRNPA1L2Q32P51 320 aaKnown RBP10.52□□□□□ -0.73
LINC01004-202ENST00000450686 ZC3H12AQ5D1E8 599 aaKnown RBP10.52□□□□□ -0.73
LINC01004-202ENST00000450686 PITRM1Q5JRX3 1037 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 C9orf64Q5T6V5 341 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
LINC01004-202ENST00000450686 SYPL2Q5VXT5 272 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 LGI2Q8N0V4 545 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 IGSF8Q969P0 613 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 KREMEN1Q96MU8 473 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 CDC6Q99741 560 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 ST7Q9NRC1 585 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 AASDHPPTQ9NRN7 309 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 FTSJ1Q9UET6 329 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 CYTH4Q9UIA0 394 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 ERVW-1Q9UQF0 538 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 CA5BQ9Y2D0 317 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 CEP83Q9Y592 693 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 PCDHGB2Q9Y5G2 931 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 PTPRQQ9UMZ3 2332 aa10.52□□□□□ -0.73
LINC01004-202ENST00000450686 TDRD6O60522 2096 aaKnown RBP10.51□□□□□ -0.73
LINC01004-202ENST00000450686 ATMQ13315 3056 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 SYNJ2BP-COX16A0A087WUM0 186 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 TNFSF14O43557 240 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 LATS1O95835 1130 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 PRB1P04280 392 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 MAT2AP31153 395 aaKnown RBP10.51□□□□□ -0.73
LINC01004-202ENST00000450686 C21orf59P57076 290 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 YWHAEP62258 255 aaKnown RBP10.51□□□□□ -0.73
LINC01004-202ENST00000450686 FKBP3Q00688 224 aaKnown RBP10.51□□□□□ -0.73
LINC01004-202ENST00000450686 APBA1Q02410 837 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 CENPCQ03188 943 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 CDH18Q13634 790 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 CCDC40Q4G0X9 1142 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
LINC01004-202ENST00000450686 NUGGCQ68CJ6 796 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms