RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 UPB1Q9UBR1 384 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 ERGIC3Q9Y282 383 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 NDUFB5O43674 189 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 CST8O60676 142 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 CD4P01730 458 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 NR4A1P22736 598 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 HARS2P49590 506 aaKnown RBP11.84□□□□□ -0.51
SHANK2-211ENST00000449833 RFX4Q33E94 735 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 NT5C1AQ9BXI3 368 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 GPRC5DQ9NZD1 345 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 FAM240BA0A1B0GVZ2 78 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 VCLP18206 1134 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 ME2P23368 584 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 DEFA5Q01523 94 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 FEZF2Q8TBJ5 459 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 RAB23Q9ULC3 237 aa11.84□□□□□ -0.51
SHANK2-211ENST00000449833 STX16-NPEPL1H3BU86 382 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 TULP2O00295 520 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 STX16O14662 325 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 C21orf2O43822 256 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 MPOP05164 745 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 DSG3P32926 999 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 SHC4Q6S5L8 630 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 DHDDSQ86SQ9 333 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 RETREG1Q9H6L5 497 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 C3orf18Q9UK00 162 aa11.83□□□□□ -0.51
SHANK2-211ENST00000449833 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.51
SHANK2-211ENST00000449833 SSX5O60225 188 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 MGRN1O60291 552 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 GPR162Q16538 588 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 DGCR6LQ9BY27 220 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 TMEM8AQ9HCN3 771 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 ATP7BP35670 1465 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 CLDN25C9JDP6 229 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 GH2P01242 217 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 CCDC58Q4VC31 144 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PROSER1Q86XN7 944 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 IL17REQ8NFR9 667 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 UNKQ9C0B0 810 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PIF1Q9H611 641 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 SSR3Q9UNL2 185 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PITRM1Q5JRX3 1037 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 HAGHLQ6PII5 290 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 B3GALNT2Q8NCR0 500 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 APOL2Q9BQE5 337 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 RBP3P10745 1247 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 OR4C6Q8NH72 309 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 TRIM9Q9C026 710 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 INTS10Q9NVR2 710 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 CBFBQ13951 182 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 CMTR2Q8IYT2 770 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 GPATCH1Q9BRR8 931 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 UBDO15205 165 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 TMEM253P0C7T8 217 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 RARGP13631 454 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 MAGEA12P43365 314 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 DPYDQ12882 1025 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 PSMD5Q16401 504 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 HDAC7Q8WUI4 952 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 GTPBP2Q9BX10 602 aaKnown RBP11.83□□□□□ -0.52
SHANK2-211ENST00000449833 SLC24A2Q9UI40 661 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 DNAJC16Q9Y2G8 782 aa11.83□□□□□ -0.52
SHANK2-211ENST00000449833 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 PRKD3O94806 890 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 CD79BP40259 229 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 NACC2Q96BF6 587 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-211ENST00000449833 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 GYPCP04921 128 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 GSTM5P46439 218 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 RFX3P48380 749 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 GALK1P51570 392 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 MYO1HQ8N1T3 1032 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 RHBDF1Q96CC6 855 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 ALG6Q9Y672 507 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 NCF1BA6NI72 391 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-211ENST00000449833 NCF1CA8MVU1 366 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-211ENST00000449833 TPBGLP0DKB5 382 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 NCF1P14598 390 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-211ENST00000449833 HNF4AP41235 474 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 RGS6P49758 472 aa11.82□□□□□ -0.52
SHANK2-211ENST00000449833 LCN1P1Q5VSP4 162 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms