RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 PCMTD1Q96MG8 357 aaPredicted RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 RPRD1AQ96P16 312 aaPredicted RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 PPP1R9BQ96SB3 815 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 SLC32A1Q9H598 525 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 FANCLQ9NW38 375 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 NCKAP1Q9Y2A7 1128 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 PI4KAP42356 2102 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 A0A1B0GTW7 788 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 FAM170AA1A519 330 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 OPHN1O60890 802 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 LSM8O95777 96 aaKnown RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 MBD3O95983 291 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 MMEP08473 750 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 PDGFRAP16234 1089 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 CTSOP43234 321 aaPredicted RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 POLR2FP61218 127 aaKnown RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 MYL5Q02045 173 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 DEUP1Q05D60 604 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 SFSWAPQ12872 951 aaKnown RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 AUHQ13825 339 aaKnown RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 HNRNPA1L2Q32P51 320 aaKnown RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 FBXL22Q6P050 247 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 CIR1Q86X95 450 aaPredicted RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 APCDD1Q8J025 514 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 MINDY1Q8N5J2 469 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 DNASE2BQ8WZ79 361 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 SNX19Q92543 992 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 MYO19Q96H55 970 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 MRGPRX3Q96LB0 322 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 SPAG5Q96R06 1193 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 NPY6RQ99463 290 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 BTBD1Q9H0C5 482 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 SIK2Q9H0K1 926 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 PCED1AQ9H1Q7 454 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 GANQ9H2C0 597 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 MTG2Q9H4K7 406 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 WDCPQ9H6R7 721 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 FAM207AQ9NSI2 230 aaPredicted RBP15.76■□□□□ 0.11
CHD3-205ENST00000449744 VANGL2Q9ULK5 521 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 SCML1Q9UN30 329 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 PAXBP1Q9Y5B6 917 aa15.76■□□□□ 0.11
CHD3-205ENST00000449744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 EDDM13A0A1B0GTR0 161 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 TARSL2A2RTX5 802 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 GOLGA8SH3BPF8 625 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 GIPC1O14908 333 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 SIN3BO75182 1162 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 PAGE1O75459 146 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 KRT37O76014 449 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 GFPT2O94808 682 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 F9P00740 461 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 CEACAM1P13688 526 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 ACSL1P33121 698 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 SCNN1AP37088 669 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 GABRB2P47870 512 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 KLK7P49862 253 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 COPB1P53618 953 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 SULT2A1Q06520 285 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 ZNF177Q13360 481 aaPredicted RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 BRMS1LQ5PSV4 323 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 CCDC183Q5T5S1 534 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 NAA35Q5VZE5 725 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 ZNF677Q86XU0 584 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 ZCCHC9Q8N567 271 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 DEFB124Q8NES8 71 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 TKTL2Q9H0I9 626 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 RSPH9Q9H1X1 276 aaPredicted RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 NLRC4Q9NPP4 1024 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 PIGVQ9NUD9 493 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 TMEM51Q9NW97 253 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 EIF2B4Q9UI10 523 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 DAAM1Q9Y4D1 1078 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 HS3ST4Q9Y661 456 aa15.75■□□□□ 0.11
CHD3-205ENST00000449744 CNOT1A5YKK6 2376 aaKnown RBP15.75■□□□□ 0.11
CHD3-205ENST00000449744 TTC34A8MYJ7 566 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 SEMA4FO95754 770 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 C7P10643 843 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 MZF1P28698 734 aaPredicted RBP15.74■□□□□ 0.11
CHD3-205ENST00000449744 SOX5P35711 763 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 GGCXP38435 758 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 STAT1P42224 750 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 NUMBP49757 651 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 NOMO3P69849 1222 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 CENPCQ03188 943 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 ARID5BQ14865 1188 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 XYLT1Q86Y38 959 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 CPA5Q8WXQ8 436 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 IGSF8Q969P0 613 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 RPL10LQ96L21 214 aaKnown RBP15.74■□□□□ 0.11
CHD3-205ENST00000449744 ZDHHC5Q9C0B5 715 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 PABPC3Q9H361 631 aaKnown RBP15.74■□□□□ 0.11
CHD3-205ENST00000449744 SGK2Q9HBY8 427 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 SLCO3A1Q9UIG8 710 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 ANGPTL2Q9UKU9 493 aa15.74■□□□□ 0.11
CHD3-205ENST00000449744 ADAMTS9Q9P2N4 1935 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms