RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 CLIC5Q9NZA1 410 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 ACSL6Q9UKU0 697 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 CA5BQ9Y2D0 317 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
AC004540.1-204ENST00000449537 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 POLQO75417 2590 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 GCNT3O95395 438 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 TNNI1P19237 187 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 PSMD8P48556 350 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF445P59923 1031 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 MYL6P60660 151 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 ZCCHC8Q6NZY4 707 aaKnown RBP13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 GUSBP11Q6P575 273 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 VASH2Q86V25 355 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 WDR48Q8TAF3 677 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 MYO19Q96H55 970 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 TUBD1Q9UJT1 453 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 LRRK1Q38SD2 2015 aa13.08□□□□□ -0.32
AC004540.1-204ENST00000449537 CENPEQ02224 2701 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 RP1P56715 2156 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 HHLA1C9JL84 531 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 RNGTTO60942 597 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 NEBLO76041 1014 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 ADH1BP00325 375 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 FAM200BP0CF97 657 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 ATICP31939 592 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 CD70P32970 193 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 EIF3IQ13347 325 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 RAB11FIP2Q7L804 512 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 RASSF8Q8NHQ8 419 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 MIB2Q96AX9 1013 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 AK8Q96MA6 479 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
AC004540.1-204ENST00000449537 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 IL1BP01584 269 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 ASLP04424 464 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 GAP43P17677 238 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 WT1P19544 449 aaPredicted RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 TNFRSF8P28908 595 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 ADORA2BP29275 332 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 UGT1A5P35504 534 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 KIF11P52732 1056 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 POLE2P56282 527 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 SPIDRQ14159 915 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 BMT2Q1RMZ1 405 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 FHL5Q5TD97 284 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 RSRC2Q7L4I2 434 aaKnown RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 TRIM69Q86WT6 500 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 CRYBG2Q8N1P7 616 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 LARP4BQ92615 738 aaKnown RBP13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 CAAP1Q9H8G2 361 aa13.06□□□□□ -0.32
AC004540.1-204ENST00000449537 EDDM13A0A1B0GTR0 161 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 TMX2-CTNND1H3BSU7 103 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 RTN2O75298 545 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 CD97P48960 835 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 OXCT1P55809 520 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 HNRNPKP61978 463 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 CUL4AQ13619 759 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 ALCAMQ13740 583 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 NR0B2Q15466 257 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
AC004540.1-204ENST00000449537 ZNF787Q6DD87 383 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms