RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NUP107P57740 925 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 INPP5AQ14642 412 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 FOXB2Q5VYV0 432 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 AAGABQ6PD74 315 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 FAM183BPQ6ZVS7 135 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 PYROXD2Q8N2H3 581 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 DNAJB14Q8TBM8 379 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZFAND2BQ8WV99 257 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ELMO1Q92556 727 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 MAGEB5Q9BZ81 275 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SYBUQ9NX95 663 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 KANSL3Q9P2N6 904 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 GON4LQ3T8J9 2241 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 C2P06681 752 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 NFICP08651 508 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SPATA31D3P0C874 917 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 PSME3P61289 254 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 TNFAIP1Q13829 316 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 CA9Q16790 459 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ARL13AQ5H913 290 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 EEF1DP3Q658K8 133 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 DPY19L2P1Q6NXN4 242 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SPATA31D4Q6ZUB0 917 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 NANOGNBQ7Z5D8 188 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZFP28Q8NHY6 868 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 MFSD3Q96ES6 412 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ACE2Q9BYF1 805 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 C5P01031 1676 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 TOR1BO14657 336 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 HDCP19113 662 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 EFNA5P52803 228 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 CYP51A1Q16850 503 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 TMTC4Q5T4D3 741 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 LRRC38Q5VT99 294 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 RPS27LQ71UM5 84 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF554Q86TJ5 538 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 DHFR2Q86XF0 187 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 PDSS2Q86YH6 399 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 FAM151AQ8WW52 585 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 SYT11Q9BT88 431 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF518BQ9C0D4 1074 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 UTP6Q9NYH9 597 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 PSAT1Q9Y617 370 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 CHADO15335 359 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 PLIN3O60664 434 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 BCL10O95999 233 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 PGK2P07205 417 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 NAMPTP43490 491 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 TRPC1P48995 793 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 MRPS15P82914 257 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 SPIDRQ14159 915 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 ADCK1Q86TW2 530 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 RNF145Q96MT1 663 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 PKP2Q99959 881 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 COPG2Q9UBF2 871 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 A0A088AWK7 358 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 TMEM233B4DJY2 109 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 ITGAXP20702 1163 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 NR1D2Q14995 579 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 TEDDM1Q5T9Z0 273 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 URGCPQ8TCY9 931 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 EDEM1Q92611 657 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 GFM2Q969S9 779 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 TMIGD2Q96BF3 282 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 PRDM12Q9H4Q4 367 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.38
UBE3B-204ENST00000449510 LRRC40Q9H9A6 602 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 HES2Q9Y543 173 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 CRYBG1Q9Y4K1 1723 aa12.65□□□□□ -0.38
UBE3B-204ENST00000449510 NEMP2A6NFY4 417 aa12.65□□□□□ -0.39
UBE3B-204ENST00000449510 ASS1P00966 412 aaKnown RBP12.65□□□□□ -0.39
UBE3B-204ENST00000449510 SUPT20HL2P0C7V6 817 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms