RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TEX264Q9Y6I9 313 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 ZNF541Q9H0D2 1346 aa19.62■□□□□ 0.73
HMGA1-205ENST00000447654 J3QRK9 145 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 M0QX08 132 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 S100BP04271 92 aaPredicted RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 SERPINE1P05121 402 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 ADSLP30566 484 aaPredicted RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 THOP1P52888 689 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 GHRHRQ02643 423 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 ALCAMQ13740 583 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 FAM47CQ5HY64 1035 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 MAMDC4Q6UXC1 1216 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 SPOCD1Q6ZMY3 1216 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 TIFABQ6ZNK6 161 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 FBXL8Q96CD0 374 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 DUS3LQ96G46 650 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 CNDP1Q96KN2 507 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 UHRF1Q96T88 793 aaPredicted RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 RIT2Q99578 217 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 YTHDF1Q9BYJ9 559 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 XPNPEP1Q9NQW7 623 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 ITM2BQ9Y287 266 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 UBIAD1Q9Y5Z9 338 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 LOC100653049A0A140TA62 436 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 FZD9O00144 591 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 RNASEH2AO75792 299 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 KRT34O76011 436 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 BCL10O95999 233 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 IFNB1P01574 187 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 XRCC1P18887 633 aaPredicted RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 GCLMP48507 274 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 TUBA1BP68363 451 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 TUBA1AQ71U36 451 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 TRMT1LQ7Z2T5 733 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 PDZD8Q8NEN9 1154 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 PNPT1Q8TCS8 783 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 TFAP2CQ92754 450 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 ATG4CQ96DT6 458 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 WDR12Q9GZL7 423 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 SMARCAD1Q9H4L7 1026 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 PDZD7Q9H5P4 517 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 SUCOQ9UBS9 1254 aaKnown RBP19.61■□□□□ 0.73
HMGA1-205ENST00000447654 IP6K2Q9UHH9 426 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 COQ4Q9Y3A0 265 aa19.61■□□□□ 0.73
HMGA1-205ENST00000447654 PCNTO95613 3336 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 CYB561D2O14569 222 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 ZNF195O14628 629 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 HTRA2O43464 458 aaPredicted RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 C1QAP02745 245 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 CD247P20963 164 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 MYF6P23409 242 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 RPS12P25398 132 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 ELK3P41970 407 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 NSFP46459 744 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SERPINB9P50453 376 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 GPC3P51654 580 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SNRPFP62306 86 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 NHSL2Q5HYW2 709 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 ZNF618Q5T7W0 954 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 NEK10Q6ZWH5 1172 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 MON1BQ7L1V2 547 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 EFCAB3Q8N7B9 438 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 RP9Q8TA86 221 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SIAEQ9HAT2 523 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 PARVAQ9NVD7 372 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 DDX56Q9NY93 547 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 XPO7Q9UIA9 1087 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 RBMX2Q9Y388 322 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 hCG_1818297A0A087WSY0 165 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 RGSL1A5PLK6 1076 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TISP43B9A030 160 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 CLDN25C9JDP6 229 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 GMNNO75496 209 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 PIAS1O75925 651 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 NCF2P19878 526 aaPredicted RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 PRKCHP24723 683 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 CDH15P55291 814 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SELENBP1Q13228 472 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 RAB39AQ14964 217 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 UGCGQ16739 394 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 FASTKD1Q53R41 847 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TFDP3Q5H9I0 405 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 ODR4Q5SWX8 454 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 C1orf220Q5T0J3 134 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 GPR107Q5VW38 600 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 KAZNQ674X7 775 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 FAM117BQ6P1L5 589 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TTC33Q6PID6 262 aaPredicted RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 MFSD7Q6UXD7 560 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TRIM72Q6ZMU5 477 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 MAVSQ7Z434 540 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 HEATR4Q86WZ0 1026 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 DSELQ8IZU8 1212 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SPERTQ8NA61 448 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 DHX38Q92620 1227 aaKnown RBP19.6■□□□□ 0.73
HMGA1-205ENST00000447654 SENP7Q9BQF6 1050 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TMEM121Q9BTD3 319 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
HMGA1-205ENST00000447654 GPN2Q9H9Y4 310 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms