RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ORC4O43929 436 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 OPA1O60313 960 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SOAT2O75908 522 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 TNFSF15O95150 251 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SIX3O95343 332 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SNRPB2P08579 225 aaKnown RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 CELA3BP08861 270 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 THEGLP0DJG4 465 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ABCB4P21439 1286 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ELAVL2Q12926 359 aaKnown RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 GRIK3Q13003 919 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ILKQ13418 452 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ALDH1L2Q3SY69 923 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 BORAQ6PGQ7 559 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 KIAA1324Q6UXG2 1013 aaKnown RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ANKS3Q6ZW76 656 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 DNAJB7Q7Z6W7 309 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 CCDC103Q8IW40 242 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 EFCAB13Q8IY85 973 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 NAGSQ8N159 534 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 MAB21L3Q8N8X9 362 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SAP25Q8TEE9 199 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 CPA5Q8WXQ8 436 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ANAPC16Q96DE5 110 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 MTMR8Q96EF0 704 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 ATXN7L3BQ96GX2 97 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 CPB2Q96IY4 423 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 DEPDC7Q96QD5 511 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 GORASP1Q9BQQ3 440 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SH2D3AQ9BRG2 576 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 NACAP1Q9BZK3 213 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 PRKRIP1Q9H875 184 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 LY9Q9HBG7 655 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 PTPRHQ9HD43 1115 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 WSB2Q9NYS7 404 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-205ENST00000447267 SEL1LQ9UBV2 794 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 YIPF1Q9Y548 306 aa5.4□□□□□ -1.54
SDCBP-205ENST00000447267 KIAA1549LQ6ZVL6 1849 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 KCNJ18B7U540 433 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 IPO5O00410 1097 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 LAD1O00515 517 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 MEIS2O14770 477 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 SGSM2O43147 1006 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 VNN2O95498 520 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 GNAT2P19087 354 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 KIF5BP33176 963 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 CSTF2P33240 577 aaKnown RBP eCLIP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 QARSP47897 775 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 E2F1Q01094 437 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 KDSRQ06136 332 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 EFEMP1Q12805 493 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 KLRB1Q12918 225 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 BFSP1Q12934 665 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TUSC3Q13454 348 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 SF1Q15637 639 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 MRM1Q6IN84 353 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 CDR2LQ86X02 465 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 MIB1Q86YT6 1006 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TEX2Q8IWB9 1127 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TRIM59Q8IWR1 403 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 CARFQ8N187 725 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF276Q8N554 614 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 BVESQ8NE79 360 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 APPBP2Q92624 585 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 PEX11GQ96HA9 241 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 YTHDC1Q96MU7 727 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TTC14Q96N46 770 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 PGLYRP2Q96PD5 576 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 ACOX2Q99424 681 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 API5Q9BZZ5 524 aaKnown RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 INO80BQ9C086 356 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TGIF2Q9GZN2 237 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 IFT122Q9HBG6 1241 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TM9SF3Q9HD45 589 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.39□□□□□ -1.558e-7■■■□□ 14.8
SDCBP-205ENST00000447267 SUCLA2Q9P2R7 463 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-205ENST00000447267 GABBR1Q9UBS5 961 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 FBXL5Q9UKA1 691 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 GIT1Q9Y2X7 761 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 RAD54BQ9Y620 910 aa5.39□□□□□ -1.55
SDCBP-205ENST00000447267 TMEM150BA6NC51 233 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 FOXP2O15409 715 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MAFGO15525 162 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 RNF113AO15541 343 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 PAPSS1O43252 624 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 NPHS1O60500 1241 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 B3GAT3O94766 335 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 KAT7O95251 611 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 HOXB2P14652 356 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 ACP1P24666 158 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 SLC5A2P31639 672 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 RBMXP38159 391 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 IFNAR2P48551 515 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 ISXQ2M1V0 245 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 ASPRV1Q53RT3 343 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MANEAQ5SRI9 462 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms