RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 PLA2G2CQ5R387 149 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 SFMBT2Q5VUG0 894 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 ACAD10Q6JQN1 1059 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CACUL1Q86Y37 369 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 TMEFF1Q8IYR6 380 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 C3orf20Q8ND61 904 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 MTG2Q9H4K7 406 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 HAUS4Q9H6D7 363 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 AIPL1Q9NZN9 384 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CYP8B1Q9UNU6 501 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 PCDHGA5Q9Y5G8 931 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 SDK1Q7Z5N4 2213 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 THADAQ6YHU6 1953 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 WDR87Q6ZQQ6 2873 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 ZBTB24O43167 697 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-203ENST00000445704 CNTN5O94779 1100 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 ASLP04424 464 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 KRT3P12035 628 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 TNFAIP3P21580 790 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 SDC4P31431 198 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 PTPN9P43378 593 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 CREB5Q02930 508 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 BYSLQ13895 437 aaKnown RBP19.36■□□□□ 0.69
HDAC4-203ENST00000445704 SF3A2Q15428 464 aaKnown RBP19.36■□□□□ 0.69
HDAC4-203ENST00000445704 ALFQ53S48 1182 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 FIGNQ5HY92 759 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 PRR23CQ6ZRP0 262 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 ARMCX6Q7L4S7 300 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 ZNF571Q7Z3V5 609 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-203ENST00000445704 DNAAF5Q86Y56 855 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 TMPRSS6Q8IU80 811 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 SELENOOQ9BVL4 669 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 EDEM3Q9BZQ6 932 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 PRDM16Q9HAZ2 1276 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 IFNKQ9P0W0 207 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 ERVW-1Q9UQF0 538 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 PAXBP1Q9Y5B6 917 aa19.36■□□□□ 0.69
HDAC4-203ENST00000445704 TNRC6BQ9UPQ9 1833 aaKnown RBP19.35■□□□□ 0.69
HDAC4-203ENST00000445704 BCLAF3A2AJT9 711 aaKnown RBP19.35■□□□□ 0.69
HDAC4-203ENST00000445704 MAP3K13O43283 966 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 ZNF217O75362 1048 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 PRKCIP41743 596 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 PTGER3P43115 390 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 DHPSP49366 369 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-203ENST00000445704 PPP1R15BQ5SWA1 713 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 WDR59Q6PJI9 974 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 LPCAT2Q7L5N7 544 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 MCOLN2Q8IZK6 566 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 DEFB119Q8N690 84 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 OR2T3Q8NH03 318 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 RMDN1Q96DB5 314 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 ALG14Q96F25 216 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 PRSS16Q9NQE7 514 aa19.35■□□□□ 0.69
HDAC4-203ENST00000445704 USP36Q9P275 1121 aaKnown RBP19.35■□□□□ 0.69
HDAC4-203ENST00000445704 RALGAPA1Q6GYQ0 2036 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 DDX3XO00571 662 aaKnown RBP eCLIP19.34■□□□□ 0.69
HDAC4-203ENST00000445704 MOCS3O95396 460 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 SKILP12757 684 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 GPD1P21695 349 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 RRM1P23921 792 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 STK19P49842 368 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-203ENST00000445704 PLK1P53350 603 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 HDAC4P56524 1084 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 LMNB2Q03252 620 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 SLC12A1Q13621 1099 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 TCEAL6Q6IPX3 200 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 STRADAQ7RTN6 431 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 METTL3Q86U44 580 aaKnown RBP19.34■□□□□ 0.69
HDAC4-203ENST00000445704 CENPIQ92674 756 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-203ENST00000445704 TCEAL3Q969E4 200 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 SIPA1Q96FS4 1042 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 RPL10LQ96L21 214 aaKnown RBP19.34■□□□□ 0.69
HDAC4-203ENST00000445704 C1orf74Q96LT6 269 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 HAPLN3Q96S86 360 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 ITM2CQ9NQX7 267 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 TMEM51Q9NW97 253 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 OR51B4Q9Y5P0 310 aa19.34■□□□□ 0.69
HDAC4-203ENST00000445704 IGLV3-10A0A075B6K4 115 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-203ENST00000445704 SIGLEC16A6NMB1 481 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 DRGXA6NNA5 263 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 E9PAM4 449 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 GDF9O60383 454 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 CLDN11O75508 207 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 SRPRAP08240 638 aaKnown RBP19.33■□□□□ 0.68
HDAC4-203ENST00000445704 ZNF806P0C7X5 589 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 CDH4P55283 916 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 ST8SIA6P61647 398 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 RPL7AP62424 266 aaKnown RBP19.33■□□□□ 0.68
HDAC4-203ENST00000445704 ECT2LQ008S8 904 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 RPL6Q02878 288 aaKnown RBP19.33■□□□□ 0.68
HDAC4-203ENST00000445704 KLHL30Q0D2K2 578 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 ZNF177Q13360 481 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-203ENST00000445704 NFKBIBQ15653 356 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 SLC36A4Q6YBV0 504 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 CYP2U1Q7Z449 544 aa19.33■□□□□ 0.68
HDAC4-203ENST00000445704 FAM172AQ8WUF8 416 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms