RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 HLA-FP30511 346 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 ADKP55263 362 aaKnown RBP12.62□□□□□ -0.39
LTBR-204ENST00000444814 SCAPQ12770 1279 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 GAS6Q14393 721 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
LTBR-204ENST00000444814 GEN1Q17RS7 908 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
LTBR-204ENST00000444814 C5orf22Q49AR2 442 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 CEP68Q76N32 757 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 CCDC170Q8IYT3 715 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 CFAP52Q8N1V2 620 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 ZBTB44Q8NCP5 570 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 TBC1D31Q96DN5 1066 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 GABRG3Q99928 467 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 C2orf49Q9BVC5 232 aaPredicted RBP12.62□□□□□ -0.39
LTBR-204ENST00000444814 MUC3BQ9H195 1237 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 OR12D3Q9UGF7 316 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
LTBR-204ENST00000444814 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
LTBR-204ENST00000444814 TMEM191CA6NGB0 347 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 K7ESF4 209 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 NRDCO43847 1150 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 SRGAP2O75044 1071 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 ZNF217O75362 1048 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 OR1E1P30953 314 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 L1CAMP32004 1257 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 PCK1P35558 622 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 PLA2G5P39877 138 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 MAPKAPK2P49137 400 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 RPL7AP62424 266 aaKnown RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 PITRM1Q5JRX3 1037 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 OTUD1Q5VV17 481 aaPredicted RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 EGFLAMQ63HQ2 1017 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 RWDD4Q6NW29 188 aaKnown RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 KIAA0907Q7Z7F0 614 aaPredicted RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 NELL1Q92832 810 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 HHIPQ96QV1 700 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 PANX2Q96RD6 677 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 NUP85Q9BW27 656 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
LTBR-204ENST00000444814 CTTNBP2NLQ9P2B4 639 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 VPS28Q9UK41 221 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 INTUQ9ULD6 942 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
LTBR-204ENST00000444814 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 DRGXA6NNA5 263 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 PROB1E7EW31 1015 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 SGK1O00141 431 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 FGF10O15520 208 aaPredicted RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 LMNAP02545 664 aaKnown RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 CYP1A2P05177 515 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 PLEKP08567 350 aaPredicted RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 TMEM253P0C7T8 217 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 RHOQP17081 205 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TFE3P19532 575 aaPredicted RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 CDC25BP30305 580 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 FNTBP49356 437 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 PLK1P53350 603 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 HDAC4P56524 1084 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 LMAN2Q12907 356 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TBX2Q13207 712 aaPredicted RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 ZNF234Q14588 700 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 ELF2Q15723 593 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 PLEKHG6Q3KR16 790 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 EMC10Q5UCC4 262 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TRNP1Q6NT89 227 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TSSK4Q6SA08 328 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 RHOT2Q8IXI1 618 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 ANAPC7Q9UJX3 599 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 COL4A3Q01955 1670 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 CXorf51AA0A1B0GTR3 108 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 ILVBLA1L0T0 632 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 TRIM24O15164 1050 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 DAPK3O43293 454 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 RPP40O75818 363 aaKnown RBP12.6□□□□□ -0.39
LTBR-204ENST00000444814 RHOBTB1O94844 696 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 GJB6O95452 261 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 EPHX1P07099 455 aa12.6□□□□□ -0.39
LTBR-204ENST00000444814 ACADMP11310 421 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms