RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	RET	P07949	1114 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	GPD1	P21695	349 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	PTPN9	P43378	593 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	COPA	P53621	1224 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	HDAC4	P56524	1084 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZBED6	P86452	979 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	SPEM2	Q0P670	501 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	PLEKHG6	Q3KR16	790 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	C5orf22	Q49AR2	442 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	RABGAP1L	Q5R372	815 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	SERPINA13P	Q6UXR4	307 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CACUL1	Q86Y37	369 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CCDC185	Q8N715	623 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	FAM172A	Q8WUF8	416 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CENPI	Q92674	756 aa	Predicted RBP	13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	ALG14	Q96F25	216 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	MRGPRX1	Q96LB2	322 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	TRIM7	Q9C029	511 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	ARRDC1-AS1	Q9H2J1	176 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	SMOC1	Q9H4F8	434 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	SLCO3A1	Q9UIG8	710 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	GMEB2	Q9UKD1	530 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CYP8B1	Q9UNU6	501 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	PLA2G4C	Q9UP65	541 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	PTPRZ1	P23471	2315 aa	Predicted RBP	13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	FRYL	O94915	3013 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677		A0A1B0GVM2	712 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	TCAF2	A6NFQ2	919 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	TTC34	A8MYJ7	566 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677		E9PAM4	449 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	FAM72C	H0Y354	149 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	SYNCRIP	O60506	623 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ATP5B	P06576	529 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ADRA1B	P35368	520 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	STK19	P49842	368 aa	Predicted RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZNF177	Q13360	481 aa	Predicted RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	MAMLD1	Q13495	774 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	STARD3	Q14849	445 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	TDRD12	Q587J7	1177 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	FAM72A	Q5TYM5	149 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	FAM72D	Q6L9T8	149 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	FAM72B	Q86X60	149 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZC3H10	Q96K80	434 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	RPL10L	Q96L21	214 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	C1orf74	Q96LT6	269 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	HAPLN3	Q96S86	360 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	PRSS16	Q9NQE7	514 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	ERVW-1	Q9UQF0	538 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	LUC7L2	Q9Y383	392 aa	Known RBP	13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	OR51B4	Q9Y5P0	310 aa		13.94	□□□□□ -0.18
GARNL3-208	ENST00000444677	OTOGL	Q3ZCN5	2332 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	SPAG17	Q6Q759	2223 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	DMXL1	Q9Y485	3027 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	NPC1	O15118	1278 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	CLDN11	O75508	207 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	EPN2	O95208	641 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	CDH4	P55283	916 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	RNF219	Q5W0B1	726 aa	Predicted RBP	13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	PMS2CL	Q68D20	193 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	PLEKHA7	Q6IQ23	1121 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	SCYL2	Q6P3W7	929 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	ARMCX6	Q7L4S7	300 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	STRADA	Q7RTN6	431 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	TFAP2D	Q7Z6R9	452 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	TMPRSS6	Q8IU80	811 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	TMEFF1	Q8IYR6	380 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	PYROXD2	Q8N2H3	581 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZNF557	Q8N988	423 aa	Predicted RBP	13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	SYN2	Q92777	582 aa	Predicted RBP	13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	PRDM16	Q9HAZ2	1276 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	ARHGAP20	Q9P2F6	1191 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	MYO1A	Q9UBC5	1043 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	CNOT8	Q9UFF9	292 aa	Known RBP	13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	ADAMTS1	Q9UHI8	967 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	USP18	Q9UMW8	372 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	GVINP1	Q7Z2Y8	2422 aa		13.93	□□□□□ -0.18
GARNL3-208	ENST00000444677	ITIH6	Q6UXX5	1313 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	IGLV3-10	A0A075B6K4	115 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZBTB24	O43167	697 aa	Predicted RBP	13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	MAP3K13	O43283	966 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	CBFA2T2	O43439	604 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	SIN3B	O75182	1162 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	RTN2	O75298	545 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	RHOBTB1	O94844	696 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	MOCS3	O95396	460 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	ASL	P04424	464 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	SERPING1	P05155	500 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	GZMA	P12544	262 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	VAV1	P15498	845 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	PTGER3	P43115	390 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	ID4	P47928	161 aa		13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	DHPS	P49366	369 aa	Predicted RBP	13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	ZNF143	P52747	638 aa	Predicted RBP	13.92	□□□□□ -0.18
GARNL3-208	ENST00000444677	PLK1	P53350	603 aa		13.92	□□□□□ -0.18

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