RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 C7orf26Q96N11 449 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 FRMD8P1Q9BZ68 369 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 NMRAL1Q9HBL8 299 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CDYLQ9Y232 598 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 SNX10Q9Y5X0 201 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 MFSD11O43934 449 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 MAGEC1O60732 1142 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CILPO75339 1184 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 ARIH2O95376 493 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 HDAC4P56524 1084 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 WASHC5Q12768 1159 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 RALGDSQ12967 914 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 PTK2BQ14289 1009 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CSHL1Q14406 222 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 RPS27LQ71UM5 84 aaKnown RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 KCTD4Q8WVF5 259 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 XYLT2Q9H1B5 865 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CHRAC1Q9NRG0 131 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 ADAMTS6Q9UKP5 1117 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 SYNPO2Q9UMS6 1093 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CRHR1P34998 444 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 SLC18A2Q05940 514 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 KLF10Q13118 480 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 AGKQ53H12 422 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 DDIASQ8IXT1 998 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 KLHL23Q8NBE8 558 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■■■■■ 33.4
HCFC1-203ENST00000444191 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CERS2Q96G23 380 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CSPG4P5Q96PW8 444 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
HCFC1-203ENST00000444191 COPG2Q9UBF2 871 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 STAP1Q9ULZ2 295 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 PCDHGC3Q9UN70 934 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 LZTS1Q9Y250 596 aa11.91□□□□□ -0.5
HCFC1-203ENST00000444191 UQCRBP14927 111 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 VAV1P15498 845 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 GRK2P25098 689 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 CHN2P52757 468 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 IL1RL1Q01638 556 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 PLD6Q8N2A8 252 aaKnown RBP11.9□□□□□ -0.5
HCFC1-203ENST00000444191 PQLC3Q8N755 202 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 FAM210AQ96ND0 272 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 USP29Q9HBJ7 922 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 SETD4Q9NVD3 440 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 ERAP1Q9NZ08 941 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 TUBGCP4Q9UGJ1 667 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 PRRC2BQ5JSZ5 2229 aaKnown RBP11.9□□□□□ -0.5
HCFC1-203ENST00000444191 C19orf81C9J6K1 198 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 HBP1O60381 514 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 LTFP02788 710 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 C2P06681 752 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 THRAP10827 490 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 STX1BP61266 288 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 ANO4Q32M45 955 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 CYGBQ8WWM9 190 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 UBE2OQ9C0C9 1292 aaKnown RBP11.9□□□□□ -0.5
HCFC1-203ENST00000444191 LIN28AQ9H9Z2 209 aaKnown RBP11.9□□□□□ -0.5
HCFC1-203ENST00000444191 DTLQ9NZJ0 730 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 AP4B1Q9Y6B7 739 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
HCFC1-203ENST00000444191 A0A0A0MRY4 1105 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 TMEM233B4DJY2 109 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 BUD23O43709 281 aaKnown RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 GABRB2P47870 512 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 GRIA4P48058 902 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 NDUFV1P49821 464 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 SLC18A1P54219 525 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 SLC10A2Q12908 348 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 SLC10A6Q3KNW5 377 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 FBXO48Q5FWF7 155 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 TEDDM1Q5T9Z0 273 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 KCNMB4Q86W47 210 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 MYLK4Q86YV6 388 aaPredicted RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 APPL2Q8NEU8 664 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 REPS2Q8NFH8 660 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 ERLEC1Q96DZ1 483 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 SPATA13Q96N96 652 aa11.9□□□□□ -0.51
HCFC1-203ENST00000444191 SSU72Q9NP77 194 aaKnown RBP11.9□□□□□ -0.51
HCFC1-203ENST00000444191 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
HCFC1-203ENST00000444191 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-203ENST00000444191 TSPAN3O60637 253 aa11.89□□□□□ -0.51
HCFC1-203ENST00000444191 LMO2P25791 158 aa11.89□□□□□ -0.51
HCFC1-203ENST00000444191 CDK7P50613 346 aa11.89□□□□□ -0.51
HCFC1-203ENST00000444191 KCTD21Q4G0X4 260 aa11.89□□□□□ -0.51
HCFC1-203ENST00000444191 OR52E8Q6IFG1 317 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms