RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 LRRC31Q6UY01 552 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 ANKS1BQ7Z6G8 1248 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 SYNPOQ8N3V7 929 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 RPLP0P6Q8NHW5 317 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 KCTD15Q96SI1 283 aaPredicted RBP16.51■□□□□ 0.23
USP39-205ENST00000442708 ACOX2Q99424 681 aa16.51■□□□□ 0.23
USP39-205ENST00000442708 PPARGC1AQ9UBK2 798 aaKnown RBP16.51■□□□□ 0.23
USP39-205ENST00000442708 CHD5Q8TDI0 1954 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 MZF1P28698 734 aaPredicted RBP16.5■□□□□ 0.23
USP39-205ENST00000442708 L1CAMP32004 1257 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 AIF1P55008 147 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 CDH4P55283 916 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 CDH18Q13634 790 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 KCNT1Q5JUK3 1230 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 ACBD5Q5T8D3 534 aaPredicted RBP16.5■□□□□ 0.23
USP39-205ENST00000442708 CHST9Q7L1S5 443 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 TFAP2DQ7Z6R9 452 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 NLRP14Q86W24 1093 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 MAML2Q8IZL2 1156 aaPredicted RBP16.5■□□□□ 0.23
USP39-205ENST00000442708 APCDD1Q8J025 514 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 IL17RCQ8NAC3 791 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 ALG14Q96F25 216 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 DHX35Q9H5Z1 703 aaKnown RBP16.5■□□□□ 0.23
USP39-205ENST00000442708 ZWILCHQ9H900 591 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 NDFIP2Q9NV92 336 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 TBC1D30Q9Y2I9 924 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 STARD13Q9Y3M8 1113 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 OR51B4Q9Y5P0 310 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 WDFY4Q6ZS81 3184 aa16.5■□□□□ 0.23
USP39-205ENST00000442708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 A0A0A6YYK5 440 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 CREB3O43889 395 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 BUB1BO60566 1050 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 CLDN11O75508 207 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 KLF8O95600 359 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 RARAP10276 462 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 MAN1A1P33908 653 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 CSKP41240 450 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 MAGEA9P43362 315 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 VAV2P52735 878 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 HADHBP55084 474 aaKnown RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 SATB1Q01826 763 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 ZNF177Q13360 481 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 ATP13A4Q4VNC1 1196 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 PITRM1Q5JRX3 1037 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 RWDD4Q6NW29 188 aaKnown RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 SPEM1Q8N4L4 309 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 CCDC33Q8N5R6 958 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 TBC1D31Q96DN5 1066 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 PDLIM2Q96JY6 352 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 ZYG11BQ9C0D3 744 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 GOLPH3Q9H4A6 298 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 SPATA6Q9NWH7 488 aaPredicted RBP16.49■□□□□ 0.23
USP39-205ENST00000442708 ELOVL2Q9NXB9 296 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 TRIM10Q9UDY6 481 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 HYOU1Q9Y4L1 999 aa16.49■□□□□ 0.23
USP39-205ENST00000442708 WASH3PC4AMC7 463 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 SGK1O00141 431 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 PJA2O43164 708 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 ADAM23O75077 832 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP39-205ENST00000442708 RHOQP17081 205 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 ARHGAP25P42331 645 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 CTSOP43234 321 aaPredicted RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 NOP2P46087 812 aaKnown RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 MRPS21P82921 87 aaKnown RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 RNF219Q5W0B1 726 aaPredicted RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 MBLAC2Q68D91 279 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 PSTKQ8IV42 348 aaKnown RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 AHI1Q8N157 1196 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 ZNF513Q8N8E2 541 aaPredicted RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 TXNDC5Q8NBS9 432 aaKnown RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 WFIKKN2Q8TEU8 576 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 CYB5D2Q8WUJ1 264 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 HSPH1Q92598 858 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 NCAPGQ9BPX3 1015 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 CIPCQ9C0C6 399 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 KIAA1522Q9P206 1035 aaPredicted RBP16.48■□□□□ 0.23
USP39-205ENST00000442708 ADGRG1Q9Y653 693 aa16.48■□□□□ 0.23
USP39-205ENST00000442708 A0A0D9SEW6 157 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 BTNL10A8MVZ5 291 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 BUB1O43683 1085 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 GOT1P17174 413 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 EPHB2P29323 1055 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 OR1E1P30953 314 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 GJC1P36383 396 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 WASP42768 502 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 ARSEP51690 589 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 PLK1P53350 603 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 KRT83P78385 493 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 DPYSL2Q16555 572 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 PTPRNQ16849 979 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 PLEKHG6Q3KR16 790 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms