RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ASIC1P78348 528 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 XIAPP98170 497 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 HSPA14Q0VDF9 509 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ACVR2BQ13705 512 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 SEMA3AQ14563 771 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 EXOC3L4Q17RC7 722 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ZFP69Q49AA0 526 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 SFT2D3Q587I9 215 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 BRDTQ58F21 947 aaPredicted RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 SLC45A4Q5BKX6 768 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 BTNL9Q6UXG8 535 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 IDO2Q6ZQW0 420 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 STOX1Q6ZVD7 989 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PDSS2Q86YH6 399 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PHC2Q8IXK0 858 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 EIF1ADQ8N9N8 165 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 NCOA7Q8NI08 942 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 RIN3Q8TB24 985 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PRR7Q8TB68 274 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 FANK1Q8TC84 345 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PDCD6IPQ8WUM4 868 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 PSPC1Q8WXF1 523 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 SNX19Q92543 992 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PIK3R3Q92569 461 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 MAML1Q92585 1016 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ZNF516Q92618 1163 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 HTRA1Q92743 480 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 SGK3Q96BR1 496 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 SDCCAG3Q96C92 435 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 NRBF2Q96F24 287 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 CDK15Q96Q40 435 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 DBNDD2Q9BQY9 259 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 C1orf50Q9BV19 199 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 WNT8AQ9H1J5 351 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 NEUROG2Q9H2A3 272 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 BLZF1Q9H2G9 400 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 TRIM45Q9H8W5 580 aaPredicted RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 GJB4Q9NTQ9 266 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 TRMT13Q9NUP7 481 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 SLC38A7Q9NVC3 462 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 MAT2BQ9NZL9 334 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 WARS2Q9UGM6 360 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 DPP7Q9UHL4 492 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 CDH22Q9UJ99 828 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 ZNF221Q9UK13 617 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 STRIP2Q9ULQ0 834 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 STARD13Q9Y3M8 1113 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 NEU2Q9Y3R4 380 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 PHRF1Q9P1Y6 1649 aaKnown RBP2.84□□□□□ -1.95
LIG4-203ENST00000442234 MYH10P35580 1976 aa2.84□□□□□ -1.95
LIG4-203ENST00000442234 FAM47DPA6NHR8 397 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PDZK1P1A8MUH7 402 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 LGALS16A8MUM7 142 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 B4E1Z4 1266 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 F8W8V4 182 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 GOLGA8SH3BPF8 625 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RNF225M0QZC1 329 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 NOP56O00567 594 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 ENPP3O14638 875 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 GH1P01241 217 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SNRPAP09012 282 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 GSTM1P09488 218 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 POLR2MP0CAP2 368 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB48P10074 688 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 PTPRAP18433 802 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 BMP6P22004 513 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 HSD17B2P37059 387 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 POLR2GP62487 172 aaKnown RBP eCLIP2.84□□□□□ -1.96
LIG4-203ENST00000442234 FKBP1BP68106 108 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MRPS5P82675 430 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 CHRNEQ04844 493 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MAPRE2Q15555 327 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 NPTX1Q15818 432 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 NFIL3Q16649 462 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 KCNT1Q5JUK3 1230 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 EFHC1Q5JVL4 640 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 LDLRAP1Q5SW96 308 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ATAD3BQ5T9A4 648 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 BTBD8Q5XKL5 378 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 KCNK18Q7Z418 384 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CLNKQ7Z7G1 428 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TMPRSS6Q8IU80 811 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CTAGE3PQ8IX95 158 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CCDC105Q8IYK2 499 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CADM3Q8N126 398 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SIX6OS1Q8N1H7 587 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 FAM109AQ8N4B1 249 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 GIMAP8Q8ND71 665 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 OR5H6Q8NGV6 325 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ANGPTL6Q8NI99 470 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 NCLNQ969V3 563 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ATP6V1E2Q96A05 226 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 VPS33AQ96AX1 596 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SH3KBP1Q96B97 665 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SIPA1Q96FS4 1042 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RMND5BQ96G75 393 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 KLHL32Q96NJ5 620 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 BTBD9Q96Q07 612 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RBM15Q96T37 977 aaKnown RBP eCLIP2.84□□□□□ -1.96
LIG4-203ENST00000442234 TMEM246Q9BRR3 403 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms