RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 FAM193AP78312 1265 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 SULT2A1Q06520 285 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 CST6Q15828 149 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 KIAA0895LQ68EN5 471 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 GJB7Q6PEY0 223 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PASD1Q8IV76 773 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 GATA6Q92908 595 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 BIRC7Q96CA5 298 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 CDC6Q99741 560 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 TM9SF3Q9HD45 589 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 OSGEPQ9NPF4 335 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 ASNSD1Q9NWL6 643 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 DDIT4Q9NX09 232 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 SLC25A13Q9UJS0 675 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 FNDC3AQ9Y2H6 1198 aaKnown RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 PCDHGB2Q9Y5G2 931 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PLXNA2O75051 1894 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 ITIH6Q6UXX5 1313 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 A0A1B0GVM2 712 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 TCAF2A6NFQ2 919 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 TTC34A8MYJ7 566 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 PES1O00541 588 aaKnown RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 MID1O15344 667 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 SLC9A1P19634 815 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 CCT8P50990 548 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 OR6B2Q6IFH4 312 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 C11orf57Q6ZUT1 292 aaPredicted RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 MMAAQ8IVH4 418 aaKnown RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 LMLNQ96KR4 655 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 MTG2Q9H4K7 406 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 IL21RQ9HBE5 538 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 FZD4Q9ULV1 537 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
TTC28-203ENST00000442232 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 ANKRD6Q9Y2G4 727 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 FRYQ5TBA9 3013 aa12.16□□□□□ -0.46
TTC28-203ENST00000442232 A0A1W2PP55 124 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 DFNA5O60443 496 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 DAB1O75553 588 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 IGLV3-25P01717 112 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 C7P10643 843 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 PON1P27169 355 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 SLC8A1P32418 973 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 CTSOP43234 321 aaPredicted RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 BPIFB4P59827 614 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 NME3Q13232 169 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 KIF19Q2TAC6 998 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 SLC45A4Q5BKX6 768 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 SND1Q7KZF4 910 aaKnown RBP eCLIP12.15□□□□□ -0.46
TTC28-203ENST00000442232 DSG4Q86SJ6 1040 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 DEFB106AQ8N104 65 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 OR2T34Q8NGX1 318 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 C1orf216Q8TAB5 229 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 RHBDD1Q8TEB9 315 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 ADAMTS14Q8WXS8 1223 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 SHC3Q92529 594 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 MYEOVQ96EZ4 313 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 MYO19Q96H55 970 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 RPL10LQ96L21 214 aaKnown RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 MRGPRX3Q96LB0 322 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 SLC2A13Q96QE2 648 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 ACP6Q9NPH0 428 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 RRN3Q9NYV6 651 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 XPO7Q9UIA9 1087 aaKnown RBP12.15□□□□□ -0.46
TTC28-203ENST00000442232 PAXBP1Q9Y5B6 917 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 SNX11Q9Y5W9 270 aa12.15□□□□□ -0.46
TTC28-203ENST00000442232 AKAP13Q12802 2813 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
TTC28-203ENST00000442232 BECN2A8MW95 431 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 GRAP2O75791 330 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 IL1BP01584 269 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 C5AR1P21730 350 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 GRK6P43250 576 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 STK19P49842 368 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms