RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RXFP3Q9NSD7 469 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 RNF181Q9P0P0 153 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 LIMA1Q9UHB6 759 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 CHORDC1Q9UHD1 332 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 SLCO3A1Q9UIG8 710 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 COPG1Q9Y678 874 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MYADML2A6NDP7 307 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 UBE2CO00762 179 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 SPRY2O43597 315 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MCM5P33992 734 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MSX2P35548 267 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPARGP37231 505 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 DGKQP52824 942 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MVDP53602 400 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 RPL7AP62424 266 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC15Q0P6D6 951 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM115Q12893 351 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 ST3GAL2Q16842 350 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GEN1Q17RS7 908 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 PARP10Q53GL7 1025 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 BMP2KLQ5H9B9 411 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GPR139Q6DWJ6 353 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 NAA16Q6N069 864 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 ACSM6Q6P461 480 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 DPY19L3Q6ZPD9 716 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM124AQ86V42 546 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MGARPQ8TDB4 240 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 NACC2Q96BF6 587 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 AGAP3Q96P47 875 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GNRHR2Q96P88 292 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 OR10A4Q9H209 315 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 SAP30LQ9HAJ7 183 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRMT1Q9NXH9 659 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM53CQ9NYF3 392 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 UTP6Q9NYH9 597 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCNE5Q9UJ90 142 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GOLGA6L10A0A0M3HER8 536 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 A0A1W2PQM1 296 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 A1L4Q6 167 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM64A6NGJ6 449 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM64BA6NI03 449 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NPIPB13A6NJU9 1138 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 A8MVJ9 347 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NPIPB4C9JG80 1138 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 SH2B2O14492 632 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 LDLRAD4O15165 306 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CTAGE5O15320 804 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 GPR42O15529 346 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ARSAP15289 507 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 AVPR2P30518 371 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 HNF1BP35680 557 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TLE3Q04726 772 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 IRF3Q14653 427 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 PTPN14Q15678 1187 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 FAM187BQ17R55 369 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 VMACQ2NL98 169 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCBE1Q6UXH8 406 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MAVSQ7Z434 540 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 SCML4Q8N228 414 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TP53I13Q8NBR0 393 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TNIP2Q8NFZ5 429 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MAFAQ8NHW3 353 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 SOCS4Q8WXH5 440 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 SAAL1Q96ER3 474 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF396Q96N95 335 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MPHOSPH9Q99550 1183 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MEGF9Q9H1U4 602 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 GLOD4Q9HC38 313 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 HDAC6Q9UBN7 1215 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CNOT6Q9ULM6 557 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 RRP15Q9Y3B9 282 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CHST2Q9Y4C5 530 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCTD3Q9Y597 815 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 PCDHGB5Q9Y5G0 923 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NESP48681 1621 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 PER2O15055 1255 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM24O15164 1050 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 BBOX1O75936 387 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 FESP07332 822 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 IGHMBP2P38935 993 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CPA2P48052 419 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 HNRNPMP52272 730 aaKnown RBP eCLIP4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 PPP5CP53041 499 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CXADRP78310 365 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 MESP2Q0VG99 397 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CBFBQ13951 182 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 CYP2A13Q16696 494 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF667Q5HYK9 610 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NUGGCQ68CJ6 796 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NAPEPLDQ6IQ20 393 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 DENND5BQ6ZUT9 1274 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 GALNTL5Q7Z4T8 443 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 ULK2Q8IYT8 1036 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 D2HGDHQ8N465 521 aa4.36□□□□□ -1.71
CDC42BPA-207ENST00000441725 NEK9Q8TD19 979 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms