RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 ART3Q13508 389 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 ARPINQ7Z6K5 226 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 NPAS2Q99743 824 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 VCX3BQ9H321 246 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 PDZD7Q9H5P4 517 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 GBA2Q9HCG7 927 aaPredicted RBP18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 TCF7L2Q9NQB0 619 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 GTSE1Q9NYZ3 720 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 TIMM13Q9Y5L4 95 aaPredicted RBP18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 KLF11O14901 512 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 FKBP6O75344 327 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 ALDH1A3P47895 512 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 KCTD2Q14681 263 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 MTHFD1LQ6UB35 978 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 CYP2R1Q6VVX0 501 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 RBM44Q6ZP01 1051 aaKnown RBP18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 EXT2Q93063 718 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 FAM167AQ96KS9 214 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 FCRL3Q96P31 734 aaPredicted RBP18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 CHRAC1Q9NRG0 131 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 ZNF180Q9UJW8 692 aa18.7■□□□□ 0.58
PTPRJ-202ENST00000440289 POLBP06746 335 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 LRRC23Q53EV4 343 aaPredicted RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 SORT1Q99523 831 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 BCLAF3A2AJT9 711 aaKnown RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 GABBR2O75899 941 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 IL18RAPO95256 599 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 UQCRBP14927 111 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 XRCC1P18887 633 aaPredicted RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 KLF10Q13118 480 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 TAZQ16635 292 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 NCBP2-AS2Q69YL0 99 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 PDSS2Q86YH6 399 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 BHLHE22Q8NFJ8 381 aaPredicted RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 APBA2Q99767 749 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 VGLL4Q14135 290 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 LCLAT1Q6UWP7 414 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 KYAT3Q6YP21 454 aaKnown RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 RNF34Q969K3 372 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 PPWD1Q96BP3 646 aaKnown RBP18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 CERS2Q96G23 380 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 TSNARE1Q96NA8 513 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 SIK2Q9H0K1 926 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 FZD8Q9H461 694 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 IL1RL2Q9HB29 575 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 VCX3AQ9NNX9 186 aa18.69■□□□□ 0.58
PTPRJ-202ENST00000440289 A0A1B0GTW7 788 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 HNRNPRO43390 633 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 BUD23O43709 281 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 RTN3O95197 1032 aaPredicted RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 PIGNO95427 931 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 JUNP05412 331 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 SRGAP2BP0DMP2 458 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 HDCP19113 662 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 GARSP41250 739 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 RPS6KA3P51812 740 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 THOP1P52888 689 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 PRAMEP78395 509 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 FSTL4Q6MZW2 842 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 MTMR14Q8NCE2 650 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 SLC7A14Q8TBB6 771 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 HIC2Q96JB3 615 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 ZMAT2Q96NC0 199 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 TRAPPC9Q96Q05 1148 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 TNFSF13BQ9Y275 285 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 A0A0A0MRY4 1105 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 TPST1O60507 370 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 CRABP2P29373 138 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 USP10Q14694 798 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 ZNF280DQ6N043 979 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 CATSPER4Q7RTX7 472 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 ZNF567Q8N184 647 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 DNERQ8NFT8 737 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 SNRNP27Q8WVK2 155 aaKnown RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 EDEM1Q92611 657 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 SPATA13Q96N96 652 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 DCDC2Q9UHG0 476 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 TLK1Q9UKI8 766 aa18.68■□□□□ 0.58
PTPRJ-202ENST00000440289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 C9JVG2 144 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 IRF6O14896 467 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 SLC5A9Q2M3M2 681 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 AFG1LQ8WV93 481 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 LIN28AQ9H9Z2 209 aaKnown RBP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 PTPRHQ9HD43 1115 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 TXNRD2Q9NNW7 524 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 HEMK1Q9Y5R4 338 aaPredicted RBP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 CITO14578 2027 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 C19orf81C9J6K1 198 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 SEC24DO94855 1032 aaPredicted RBP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 AOC1P19801 751 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 GNL1P36915 607 aaPredicted RBP18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 CTBP1Q13363 440 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 TLR1Q15399 786 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 SLC9A4Q6AI14 798 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 FBXW8Q8N3Y1 598 aa18.67■□□□□ 0.58
PTPRJ-202ENST00000440289 MCUQ8NE86 351 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms