RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 DCAF4L1Q3SXM0 396 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NOTUMQ6P988 496 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF781Q8N8C0 355 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 B3GALNT2Q8NCR0 500 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 ARRDC4Q8NCT1 418 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NDE1Q9NXR1 346 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF212Q9UDV6 495 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NEMP1O14524 444 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 HUS1O60921 280 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 GPR32O75388 356 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 SERPINE1P05121 402 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 MMP3P08254 477 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 CPA3P15088 417 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 EFHC1Q5JVL4 640 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 RABGAP1LQ5R372 815 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 WSCD1Q658N2 575 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 STEAP4Q687X5 459 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 FSTL4Q6MZW2 842 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 ISLR2Q6UXK2 745 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 C4orf22Q6V702 233 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 RAPH1Q70E73 1250 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 NET1Q7Z628 596 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 HPS6Q86YV9 775 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 EDEM1Q92611 657 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 PLEKHA5Q9HAU0 1116 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 CHRAC1Q9NRG0 131 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 OPHN1O60890 802 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 ERCC2P18074 760 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 MSX2P35548 267 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 COPAP53621 1224 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 AP2B1P63010 937 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 PPIL2Q13356 520 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 TRMT5Q32P41 509 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 STRADAQ7RTN6 431 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 CRYBG2Q8N1P7 616 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 SCOCQ9UIL1 159 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 UBQLN1Q9UMX0 589 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 PTPRFP10586 1907 aa13.88□□□□□ -0.19
HERPUD1-204ENST00000439977 PIRO00625 290 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ZBTB24O43167 697 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CYP2C9P11712 490 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 AOC1P19801 751 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 GLRBP48167 497 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 TKTL1P51854 596 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CUL3Q13618 768 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 FRMD7Q6ZUT3 714 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 DEFB107AQ8IZN7 70 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 SIX6OS1Q8N1H7 587 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 NPWQ8N729 165 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 MAPK15Q8TD08 544 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 USP33Q8TEY7 942 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CELF6Q96J87 481 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 WDR55Q9H6Y2 383 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 YJEFN3A6XGL0 299 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 LTFP02788 710 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CNTFP26441 200 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 AVPR1AP37288 418 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 GP5P40197 560 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 AFF1P51825 1210 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 LILRA4P59901 499 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 PDK1Q15118 436 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 IRGCQ6NXR0 463 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 RNF111Q6ZNA4 994 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF410Q86VK4 478 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 MYLK4Q86YV6 388 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 APBB2Q92870 758 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 RHOBTB2Q9BYZ6 727 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 COG4Q9H9E3 785 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ANGPTL2Q9UKU9 493 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 VANGL2Q9ULK5 521 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 A0A096LPK6 155 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 ZBTB14O43829 449 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 HSPA4LO95757 839 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CHRNGP07510 517 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 PTPN3P26045 913 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 SERPINB5P36952 375 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 DGKDQ16760 1214 aa13.87□□□□□ -0.19
HERPUD1-204ENST00000439977 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms