RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TMEM102Q8N9M5 508 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 COLGALT1Q8NBJ5 622 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PDZD8Q8NEN9 1154 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC35B2Q8TB61 432 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC7A14Q8TBB6 771 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PHOSPHO2Q8TCD6 241 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 RNF139Q8WU17 664 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 C1orf54Q8WWF1 131 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 RSAD2Q8WXG1 361 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 RIN2Q8WYP3 895 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 P3H4Q92791 437 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NXPE3Q969Y0 559 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAF2Q96CS3 445 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNF8Q96H20 258 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PIWIL1Q96J94 861 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC114Q96M63 670 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 RNF157Q96PX1 679 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PEBP4Q96S96 227 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CDK5RAP1Q96SZ6 601 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 YME1L1Q96TA2 773 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF670Q9BS34 389 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNRNP25Q9BV90 132 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 HERC2P3Q9BVR0 1158 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FUT8Q9BYC5 575 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTIF3Q9H2K0 278 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMOC2Q9H3U7 446 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SUV39H2Q9H5I1 410 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DHX35Q9H5Z1 703 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CWH43Q9H720 699 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCDH18Q9HCL0 1135 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CHST7Q9NS84 486 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 OLA1Q9NTK5 396 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TMLHEQ9NVH6 421 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 KLHL11Q9NVR0 708 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF446Q9NWS9 450 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DONSONQ9NYP3 566 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLIC5Q9NZA1 410 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 IL37Q9NZH6 218 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NOP53Q9NZM5 478 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 OGFRQ9NZT2 677 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTRRQ9UBK8 725 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ANAPC5Q9UJX4 755 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FZD10Q9ULW2 581 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NFU1Q9UMS0 254 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 AP4E1Q9UPM8 1137 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NAALADL1Q9UQQ1 740 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCML2Q9UQR0 700 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAD54BQ9Y620 910 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CEP290O15078 2479 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ESYT3A0FGR9 886 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM92AA1XBS5 289 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTMR11A4FU01 709 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 HACD1B0YJ81 288 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 NT5C1B-RDH14C9J2C7 533 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SGK1O00141 431 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAP2K7O14733 419 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 NCAM2O15394 837 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ABLIM3O94929 683 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 GJB5O95377 273 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 C1RP00736 705 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT14P02533 472 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 URODP06132 367 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 FYNP06241 537 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OR4Q2P0C623 313 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 EPHA1P21709 976 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 IL4RP24394 825 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 YWHAQP27348 245 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCR1P32246 355 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OR1D2P34982 312 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACTN2P35609 894 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 HSPA9P38646 679 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RPL21P46778 160 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ALDH1A3P47895 512 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 KCNJ1P48048 391 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP3CCP48454 512 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC5A3P53794 718 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PLTPP55058 493 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARPP19P56211 112 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 EIF3EP60228 445 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DYNLT1P63172 113 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MRPS25P82663 173 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 HTRA4P83105 476 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OTUD4Q01804 1114 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 ROR1Q01973 937 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PLD1Q13393 1074 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAB33AQ14088 237 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP2R5DQ14738 602 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CASP8Q14790 479 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 MORF4L2Q15014 288 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 PDK1Q15118 436 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 LLGL1Q15334 1064 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 OASLQ15646 514 aaKnown RBP4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAF12Q16514 161 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDR2Q16832 855 aa4.1□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC142Q17RM4 750 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms