RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PITRM1Q5JRX3 1037 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 DNAJC24Q6P3W2 148 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 EMC1Q8N766 993 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 WFDC5Q8TCV5 224 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 LMLNQ96KR4 655 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 TMEM245Q9H330 911 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 HAUS4Q9H6D7 363 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 ITM2CQ9NQX7 267 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 CYP8B1Q9UNU6 501 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 ERVW-1Q9UQF0 538 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.68
MCF2L-216ENST00000439475 ABCA7Q8IZY2 2146 aa10.79□□□□□ -0.68
MCF2L-216ENST00000439475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 IGHV1OR15-9A0A0B4J2B8 117 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 A0A1W2PQJ5 194 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 BCLAF3A2AJT9 711 aaKnown RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 TARSL2A2RTX5 802 aaKnown RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 C2CD4BA6NLJ0 364 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 DRGXA6NNA5 263 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 KHNYNO15037 678 aaKnown RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SRGAP2O75044 1071 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 DNTTP04053 509 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 RHOCP08134 193 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 HLA-EP13747 358 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 TFE3P19532 575 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 BCKDHBP21953 392 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PRKCHP24723 683 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 CD6P30203 668 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 KRT83P78385 493 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 ZBED6P86452 979 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 ZBTB16Q05516 673 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PTP4A2Q12974 167 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 CAMK2GQ13555 558 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PUM1Q14671 1186 aaKnown RBP eCLIP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PTPRNQ16849 979 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 CCDC14Q49A88 953 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SYCP2LQ5T4T6 812 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 CYP2U1Q7Z449 544 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 RABEPKQ7Z6M1 372 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SETD3Q86TU7 594 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 FAM131BQ86XD5 332 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 TMEFF1Q8IYR6 380 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 JOSD2Q8TAC2 188 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PIGKQ92643 395 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 IGSF8Q969P0 613 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 MYEOVQ96EZ4 313 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 MUC3BQ9H195 1237 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 RETREG1Q9H6L5 497 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 CD248Q9HCU0 757 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 PARVAQ9NVD7 372 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 IFNKQ9P0W0 207 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SLC25A13Q9UJS0 675 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 INTS6Q9UL03 887 aaKnown RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 NCKAP1Q9Y2A7 1128 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 LUC7L2Q9Y383 392 aaKnown RBP10.78□□□□□ -0.68
MCF2L-216ENST00000439475 SDK1Q7Z5N4 2213 aa10.78□□□□□ -0.68
MCF2L-216ENST00000439475 TMCO5BA8MYB1 307 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 E9PAM4 449 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 RTN2O75298 545 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TPM1P09493 284 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TGM1P22735 817 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 OR1E1P30953 314 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 RFC1P35251 1148 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ADRA1BP35368 520 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ATXN1P54253 815 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF33AQ06730 810 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 C15orf59Q2T9L4 293 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ACCSLQ4AC99 568 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TDRD12Q587J7 1177 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 OTUD1Q5VV17 481 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 LYSMD4Q5XG99 296 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 SCYL2Q6P3W7 929 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 MON1BQ7L1V2 547 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 BNIPLQ7Z465 357 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 C14orf80Q86SX3 495 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 RGL4Q8IZJ4 473 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 APCDD1Q8J025 514 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 CEP76Q8TAP6 659 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 NETO1Q8TDF5 533 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 FAM172AQ8WUF8 416 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 CPLX3Q8WVH0 158 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 CENPIQ92674 756 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 SYN2Q92777 582 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ERLEC1Q96DZ1 483 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TRIM11Q96F44 468 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 ZYG11BQ9C0D3 744 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TTYH3Q9C0H2 523 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 MKRN2Q9H000 416 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms