RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TCAF2A6NFQ2 919 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 FAM47DPA6NHR8 397 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 TTC34A8MYJ7 566 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 FOXN3O00409 490 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 GJB3O75712 270 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 TOP3BO95985 862 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 PROS1P07225 676 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 ERCC5P28715 1186 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CTSOP43234 321 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CSNK1EP49674 416 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 OXCT1P55809 520 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 RAPGEF1Q13905 1077 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 TRIP6Q15654 476 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CST6Q15828 149 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 USP30Q70CQ3 517 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 ADAT2Q7Z6V5 191 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CIR1Q86X95 450 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CCAR2Q8N163 923 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 SETD7Q8WTS6 366 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 BIRC7Q96CA5 298 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 MRGPRX3Q96LB0 322 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 CAMK1GQ96NX5 476 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 RPRD1AQ96P16 312 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 PPP1R9BQ96SB3 815 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 OMDQ99983 421 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 SIX2Q9NPC8 291 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 FBXL12Q9NXK8 326 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 AJAP1Q9UKB5 411 aaPredicted RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 WASF3Q9UPY6 502 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 EPG5Q9HCE0 2579 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 MAP1BP46821 2468 aaKnown RBP19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 A0A1B0GVT2 93 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 C1QTNF9BB2RNN3 333 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 HYAL3O43820 417 aaPredicted RBP19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 DAB1O75553 588 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 RNASEH2AO75792 299 aaKnown RBP19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 ERBB2P04626 1255 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 C1QTNF9P0C862 333 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 PNMA6AP0CW24 399 aaPredicted RBP19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 C7P10643 843 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 PDGFRAP16234 1089 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 CACNA1BQ00975 2339 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC6A3Q01959 620 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 SULT2A1Q06520 285 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 ARID5BQ14865 1188 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 CACNA1EQ15878 2313 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 ZNF423Q2M1K9 1284 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 HLA-BQ31612 363 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 OLFML1Q6UWY5 402 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 MMAAQ8IVH4 418 aaKnown RBP19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 APCDD1Q8J025 514 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 RPL10LQ96L21 214 aaKnown RBP19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 PLCB1Q9NQ66 1216 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 TM7SF3Q9NS93 570 aa19.04■□□□□ 0.64
AC004540.1-201ENST00000439120 ITIH6Q6UXX5 1313 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 M0QYT0 321 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 MID1O15344 667 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 CD27P26842 260 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 NOS2P35228 1153 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 CLCN1P35523 988 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 PSMD8P48556 350 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 NUMBP49757 651 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 FAM193AP78312 1265 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 C9orf64Q5T6V5 341 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC26A9Q7LBE3 791 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 ZDHHC17Q8IUH5 632 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 FAM71AQ8IYT1 594 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 TMEM35BQ8NCS4 154 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 C1orf216Q8TAB5 229 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 PRMT1Q99873 361 aaKnown RBP19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 IL21RQ9HBE5 538 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 TM9SF3Q9HD45 589 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 SLCO3A1Q9UIG8 710 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 NEUROG3Q9Y4Z2 214 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 NUMA1Q14980 2115 aa19.03■□□□□ 0.64
AC004540.1-201ENST00000439120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 A0A1W2PP55 124 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 LRRC72A6NJI9 287 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 PCNX2A6NKB5 2137 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 ADH1BP00325 375 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 ZNF883P0CG24 379 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 GRIA4P48058 902 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 STK19P49842 368 aaPredicted RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 RNASE9P60153 205 aaKnown RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 ZNF177Q13360 481 aaPredicted RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 EIF4EBP2Q13542 120 aaPredicted RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 KCNJ12Q14500 433 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 DRAP1Q14919 205 aaPredicted RBP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 PTPN20Q4JDL3 420 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 MIIPQ5JXC2 388 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 KIAA0895LQ68EN5 471 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 FBXL22Q6P050 247 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 SND1Q7KZF4 910 aaKnown RBP eCLIP19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 OSGEPQ9NPF4 335 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 RRN3Q9NYV6 651 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC25A13Q9UJS0 675 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 FZD4Q9ULV1 537 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 STAP1Q9ULZ2 295 aa19.02■□□□□ 0.64
AC004540.1-201ENST00000439120 FNDC3AQ9Y2H6 1198 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms