RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 FUT11Q495W5 492 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 ERMARDQ5T6L9 678 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 CXorf57Q6NSI4 855 aaKnown RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 RWDD4Q6NW29 188 aaKnown RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 CPNE8Q86YQ8 564 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 ZNF513Q8N8E2 541 aaPredicted RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 TBC1D31Q96DN5 1066 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 LMLNQ96KR4 655 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 EPAS1Q99814 870 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 DHX35Q9H5Z1 703 aaKnown RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 ZDHHC4Q9NPG8 344 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 RCCD1A6NED2 376 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 CREB3O43889 395 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 CSKP41240 450 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 SSR1P43307 286 aaKnown RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 VAV2P52735 878 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 SEMA3BQ13214 749 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ZNF177Q13360 481 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 MESDQ14696 234 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KCNT1Q5JUK3 1230 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 EGFLAMQ63HQ2 1017 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 TMEM215Q68D42 235 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KIAA0907Q7Z7F0 614 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KIAA1328Q86T90 577 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ADIPOR2Q86V24 386 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ALLCQ8N6M5 410 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ACDQ96AP0 544 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KCTD15Q96SI1 283 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 CIPCQ9C0C6 399 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KIAA1522Q9P206 1035 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 HCN2Q9UL51 889 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 STARD13Q9Y3M8 1113 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 CACNA1IQ9P0X4 2223 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 A0A0A6YYK5 440 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 CHURC1-FNTBB4DL54 471 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 HOXC13P31276 330 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 GJC1P36383 396 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ARHGAP25P42331 645 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 NOP2P46087 812 aaKnown RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 KRT83P78385 493 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 MRPS21P82921 87 aaKnown RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 PITRM1Q5JRX3 1037 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 TXNRD3NBQ6F5E7 133 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 PSTKQ8IV42 348 aaKnown RBP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 SPEM1Q8N4L4 309 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 OR52K2Q8NGK3 314 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 SORCS1Q8WY21 1168 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 HSPH1Q92598 858 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
TARDBP-203ENST00000439080 C2orf42Q9NWW7 574 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ZNF212Q9UDV6 495 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 TBC1D30Q9Y2I9 924 aa17.4■□□□□ 0.38
TARDBP-203ENST00000439080 ATG13O75143 517 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 RHOCP08134 193 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 RHOQP17081 205 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 EPHB2P29323 1055 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 OR1E1P30953 314 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 NUMBP49757 651 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 CCR3P51677 355 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 HADHBP55084 474 aaKnown RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 TPI1P60174 286 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 CCZ1BP86790 482 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 SATB1Q01826 763 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 HADHQ16836 314 aaKnown RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 PLEKHG6Q3KR16 790 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 PPP6R3Q5H9R7 873 aaPredicted RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 C6orf118Q5T5N4 469 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 MBLAC2Q68D91 279 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 NLRP14Q86W24 1093 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 TXNDC5Q8NBS9 432 aaKnown RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 UCMAQ8WVF2 138 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 TEKT4Q8WW24 435 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 ELOVL2Q9NXB9 296 aa17.39■□□□□ 0.37
TARDBP-203ENST00000439080 INTS6Q9UL03 887 aaKnown RBP17.39■□□□□ 0.37
TARDBP-203ENST00000439080 EML5Q05BV3 1969 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 EEF2KO00418 725 aaKnown RBP17.38■□□□□ 0.37
TARDBP-203ENST00000439080 PJA2O43164 708 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 GALR2O43603 387 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-203ENST00000439080 NRDCO43847 1150 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 MOCS3O95396 460 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 RARAP10276 462 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 MZF1P28698 734 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-203ENST00000439080 HTR7P34969 479 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 NUBP1P53384 320 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 OXCT1P55809 520 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 TAS2R40P59535 323 aa17.38■□□□□ 0.37
TARDBP-203ENST00000439080 SLC12A1Q13621 1099 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms