RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ABCA7Q8IZY2 2146 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 OR2T3Q8NH03 318 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 PRCCQ92733 491 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 IGSF8Q969P0 613 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 SIPA1Q96FS4 1042 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 HAPLN3Q96S86 360 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 VPS45Q9NRW7 570 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 MBD1Q9UIS9 605 aaPredicted RBP25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 CYP8B1Q9UNU6 501 aa25.5■■□□□ 1.67
RAPGEF1-206ENST00000438647 CKAP5Q14008 2032 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 RALGAPA1Q6GYQ0 2036 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 DMXL1Q9Y485 3027 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 IGHV1OR15-9A0A0B4J2B8 117 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 BCLAF3A2AJT9 711 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 ANKRD62A6NC57 917 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 ENDOD1O94919 500 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 SRPRAP08240 638 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 ZNF806P0C7X5 589 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 PTPN9P43378 593 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 DHPSP49366 369 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 ATXN1P54253 815 aaKnown RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 CDH4P55283 916 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 SULT2A1Q06520 285 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 PLA2G2CQ5R387 149 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 RNF219Q5W0B1 726 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 ACAD10Q6JQN1 1059 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 DNAJC24Q6P3W2 148 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 CYP2U1Q7Z449 544 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 FAM131BQ86XD5 332 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 FRMD1Q8N878 549 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 C12orf50Q8NA57 414 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 IQCDQ96DY2 449 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 SLC6A17Q9H1V8 727 aa25.49■■□□□ 1.67
RAPGEF1-206ENST00000438647 THADAQ6YHU6 1953 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 TPM3P06753 285 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 ACADMP11310 421 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 GGCXP38435 758 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 DPP6P42658 865 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 ID4P47928 161 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 COPAP53621 1224 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 ECT2LQ008S8 904 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 RPL6Q02878 288 aaKnown RBP25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 CDO1Q16878 200 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 ARL13BQ3SXY8 428 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 STRADAQ7RTN6 431 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 C14orf80Q86SX3 495 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 JOSD2Q8TAC2 188 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 VCPIP1Q96JH7 1222 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 SYT11Q9BT88 431 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 ANLNQ9NQW6 1124 aa25.48■■□□□ 1.67
RAPGEF1-206ENST00000438647 MUC22E2RYF6 1773 aaPredicted RBP25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 SIGLEC16A6NMB1 481 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 NNMTP40261 264 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 PRKCIP41743 596 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 PLK1P53350 603 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 CCDC14Q49A88 953 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 CXorf57Q6NSI4 855 aaKnown RBP25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 TMEFF1Q8IYR6 380 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 ZNF366Q8N895 744 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 HAUS4Q9H6D7 363 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 ITM2CQ9NQX7 267 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 USP36Q9P275 1121 aaKnown RBP25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 ERVW-1Q9UQF0 538 aa25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.47■■□□□ 1.67
RAPGEF1-206ENST00000438647 A0A1W2PQJ5 194 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 I6L893 689 aaPredicted RBP25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 NDUFS2O75306 463 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 DESP17661 470 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 GPD1P21695 349 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 OXTRP30559 389 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 RFC1P35251 1148 aaPredicted RBP25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 PBX1P40424 430 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 KLHL30Q0D2K2 578 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 ARID5BQ14865 1188 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 CCDC6Q16204 474 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 C15orf59Q2T9L4 293 aaPredicted RBP25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 HNRNPA1L2Q32P51 320 aaKnown RBP25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 LYSMD4Q5XG99 296 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 MCOLN2Q8IZK6 566 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 APCDD1Q8J025 514 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 MYO19Q96H55 970 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 PRSS16Q9NQE7 514 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 TBC1D30Q9Y2I9 924 aa25.46■■□□□ 1.67
RAPGEF1-206ENST00000438647 E9PAM4 449 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 GJB6O95452 261 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 MZF1P28698 734 aaPredicted RBP25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 CD6P30203 668 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZBTB16Q05516 673 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 AASDHQ4L235 1098 aaPredicted RBP25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 WDR59Q6PJI9 974 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 ZNF683Q8IZ20 524 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 FAM172AQ8WUF8 416 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 CENPIQ92674 756 aaPredicted RBP25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 MRGPRX3Q96LB0 322 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 IFNKQ9P0W0 207 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 CDV3Q9UKY7 258 aaKnown RBP25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 SPTBN4Q9H254 2564 aa25.45■■□□□ 1.66
RAPGEF1-206ENST00000438647 ITIH6Q6UXX5 1313 aa25.44■■□□□ 1.66
RAPGEF1-206ENST00000438647 IGLV3-10A0A075B6K4 115 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms