RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 INTS6Q9UL03 887 aaKnown RBP18.12■□□□□ 0.49
SBDSP1-203ENST00000437201 FHOD1Q9Y613 1164 aa18.12■□□□□ 0.49
SBDSP1-203ENST00000437201 CNOT1A5YKK6 2376 aaKnown RBP18.12■□□□□ 0.49
SBDSP1-203ENST00000437201 GON4LQ3T8J9 2241 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 EDDM13A0A1B0GTR0 161 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 LSM8O95777 96 aaKnown RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 F9P00740 461 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 CDH5P33151 784 aaPredicted RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 RDXP35241 583 aaKnown RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 PITX1P78337 314 aaPredicted RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 NME3Q13232 169 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 PTPN20Q4JDL3 420 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 DPY19L2P1Q6NXN4 242 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 ERICH1Q86X53 443 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 CCAR2Q8N163 923 aaKnown RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 DEFB124Q8NES8 71 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 ANKRD20A12PQ8NF67 263 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 GANCQ8TET4 914 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 RPRD1AQ96P16 312 aaPredicted RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 NAA15Q9BXJ9 866 aaKnown RBP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 FSCN3Q9NQT6 498 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 DAAM1Q9Y4D1 1078 aa18.11■□□□□ 0.49
SBDSP1-203ENST00000437201 M0QYT0 321 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 GIPC1O14908 333 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 SEMA4FO95754 770 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 PNMA6AP0CW24 399 aaPredicted RBP18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 GABRB2P47870 512 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 BRMS1LQ5PSV4 323 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 FKBP15Q5T1M5 1219 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 FBXL22Q6P050 247 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 SASS6Q6UVJ0 657 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 MMS22LQ6ZRQ5 1243 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 ZCCHC9Q8N567 271 aaKnown RBP18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 SNX19Q92543 992 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 MYO19Q96H55 970 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 WDCPQ9H6R7 721 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 EIF2B4Q9UI10 523 aaKnown RBP18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 PI4KAP42356 2102 aa18.1■□□□□ 0.49
SBDSP1-203ENST00000437201 ITIH6Q6UXX5 1313 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 F8VZ95 297 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 SIN3BO75182 1162 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 CLDN11O75508 207 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 CER1O95813 267 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 ACSL1P33121 698 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 AFF3P51826 1226 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 PLK1P53350 603 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 RNASE9P60153 205 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 GRIK2Q13002 908 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 ZNF177Q13360 481 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 AUHQ13825 339 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 TEAD4Q15561 434 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 ZNF677Q86XU0 584 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 DHX40Q8IX18 779 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 NPY6RQ99463 290 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 TAB2Q9NYJ8 693 aa18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-203ENST00000437201 PDGFRAP16234 1089 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 VASPP50552 380 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 CST6Q15828 149 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 C9orf64Q5T6V5 341 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 FAM102AQ5T9C2 384 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 CDKAL1Q5VV42 579 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 RBM43Q6ZSC3 357 aaKnown RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 APCDD1Q8J025 514 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 PGAP3Q96FM1 320 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 OMDQ99983 421 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 VPS16Q9H269 839 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 C6orf106Q9H6K1 298 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 OSGEPQ9NPF4 335 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 FBXL12Q9NXK8 326 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 SLC25A13Q9UJS0 675 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 FZD4Q9ULV1 537 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 HS3ST4Q9Y661 456 aa18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 MUC22E2RYF6 1773 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-203ENST00000437201 LRRC72A6NJI9 287 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 TTC34A8MYJ7 566 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 PAGE1O75459 146 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 ADH1BP00325 375 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 CD27P26842 260 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 CTSOP43234 321 aaPredicted RBP18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 CXCR3P49682 368 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 SULT1E1P49888 294 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 CDH4P55283 916 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 DEUP1Q05D60 604 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 ELAVL3Q14576 367 aaKnown RBP18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 KRT31Q15323 416 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 SLC25A52Q3SY17 297 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 TAF3Q5VWG9 929 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 LRRC31Q6UY01 552 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 DSG4Q86SJ6 1040 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 MMAAQ8IVH4 418 aaKnown RBP18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 NT5C3BQ969T7 300 aa18.07■□□□□ 0.48
SBDSP1-203ENST00000437201 RPL10LQ96L21 214 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms