RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 OR2T34Q8NGX1 318 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 DHTKD1Q96HY7 919 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TIGD1Q96MW7 591 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 DDX50Q9BQ39 737 aaKnown RBP11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 PCDHGA1Q9Y5H4 931 aa11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 COL5A1P20908 1838 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1P4-201ENST00000435997 A0A087WV48 116 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 A0A1W2PR77 199 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TTC34A8MYJ7 566 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 E9PAM4 449 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 KCNK3O14649 394 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 LATO43561 262 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 BMP6P22004 513 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CCR5P51681 352 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MARSP56192 900 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ST8SIA6P61647 398 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 IL9RQ01113 521 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ELAVL3Q14576 367 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 INAVAQ3KP66 663 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SOWAHCQ53LP3 525 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SYPL2Q5VXT5 272 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 C19orf48Q6RUI8 117 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RRAGAQ7L523 313 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SAP25Q8TEE9 199 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PTPRN2Q92932 1015 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FAM129BQ96TA1 746 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ELF4Q99607 663 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MIS12Q9H081 205 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 STIM2Q9P246 746 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FTSJ1Q9UET6 329 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CYTH4Q9UIA0 394 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MAN1B1Q9UKM7 699 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ITPR1Q14643 2758 aa11.33□□□□□ -0.6
SPTLC1P4-201ENST00000435997 EDDM13A0A1B0GTR0 161 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FAM149AA5PLN7 773 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRABD2BA6NFA1 517 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 WNT9AO14904 365 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 YKT6O15498 198 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 C5AR1P21730 350 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MZF1P28698 734 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 DRD3P35462 400 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PPP1R2P41236 205 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ACADSBP45954 432 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 C21orf59P57076 290 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PITX1P78337 314 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ECT2LQ008S8 904 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SFMBT2Q5VUG0 894 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CXorf57Q6NSI4 855 aaKnown RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ADAT2Q7Z6V5 191 aaKnown RBP11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TMPRSS12Q86WS5 348 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 APCDD1Q8J025 514 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CARNMT1Q8N4J0 409 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FRS2Q8WU20 508 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FAM149B1Q96BN6 582 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 BTN2A3PQ96KV6 586 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLCO3A1Q9UIG8 710 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NCKAP1Q9Y2A7 1128 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PTPRBP23467 1997 aa11.32□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 LRRC72A6NJI9 287 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 E5RJQ4 531 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 RNASEH2AO75792 299 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TRUB2O95900 331 aaKnown RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ADH1BP00325 375 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 APOEP02649 317 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 GOT1P17174 413 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 TACR2P21452 398 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CD38P28907 300 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 SLC8A1P32418 973 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PSMD8P48556 350 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 ACADVLP49748 655 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 STK19P49842 368 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 NXPH1P58417 271 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PPP2CBP62714 309 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 PPP2CAP67775 309 aa11.31□□□□□ -0.6
SPTLC1P4-201ENST00000435997 CETN1Q12798 172 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms