RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MYBPC1Q00872 1141 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 FAM136AQ96C01 138 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 UROC1Q96N76 676 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CYLDQ9NQC7 956 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 TMEM216Q9P0N5 145 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 CORO2BQ9UQ03 480 aa11.41□□□□□ -0.58
SCN4A-201ENST00000435607 A0A0A6YYK5 440 aaPredicted RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 H3BUI4 141 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 BATF3Q9NR55 127 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF780BQ9Y6R6 833 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 TLL1O43897 1013 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 RPL4P36578 427 aaKnown RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CSHL1Q14406 222 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 E2F4Q16254 413 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 BNIPLQ7Z465 357 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 STX12Q86Y82 276 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 EEF1AKMT1Q8WVE0 214 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 RASSF1Q9NS23 344 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 SLC28A1O00337 649 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ASGR1P07306 291 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 SRGNP10124 158 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ZSWIM7Q19AV6 140 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 RAET1GQ6H3X3 334 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 FBXO38Q6PIJ6 1188 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 JAMLQ86YT9 394 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ARID3BQ8IVW6 561 aaPredicted RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 BEND7Q8N7W2 519 aaPredicted RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ENKURQ8TC29 256 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 LMAN2LQ9H0V9 348 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 BAIAP3O94812 1187 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 FTH1P02794 183 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CCDC166P0CW27 439 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CSH1P0DML2 217 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CSH2P0DML3 217 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 DSG1Q02413 1049 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CDH17Q12864 832 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 KCNT1Q5JUK3 1230 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 PROSER1Q86XN7 944 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 TDRD5Q8NAT2 981 aaKnown RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 NSMCE2Q96MF7 247 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 GNPTGQ9UJJ9 305 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ANKRD6Q9Y2G4 727 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 TPRKBQ9Y3C4 175 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 GHRP10912 638 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 CCND1P24385 295 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 GSTM5P46439 218 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 GLRBP48167 497 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 TMEM86AQ8N2M4 240 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 SYN2Q92777 582 aaPredicted RBP11.4□□□□□ -0.58
SCN4A-201ENST00000435607 SLC38A2Q96QD8 506 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 SLC9A8Q9Y2E8 581 aa11.4□□□□□ -0.58
SCN4A-201ENST00000435607 E7ENQ6 273 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 GALNT7Q86SF2 657 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 ERP44Q9BS26 406 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 SPATC1LQ9H0A9 340 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 NDUFA13Q9P0J0 144 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF510Q9Y2H8 683 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 ALG6Q9Y672 507 aa11.4□□□□□ -0.59
SCN4A-201ENST00000435607 TMEM120BA0PK00 339 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SNAP23O00161 211 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 CES2O00748 559 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 FKTNO75072 461 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 BMP7P18075 431 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 NME5P56597 212 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ACSM2AQ08AH3 577 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 KPNB1Q14974 876 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ACSM2BQ68CK6 577 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 HCAR2Q8TDS4 363 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 RNPEPQ9H4A4 650 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ATP13A3Q9H7F0 1226 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ARL15Q9NXU5 204 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 BARX2Q9UMQ3 279 aaPredicted RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 CHP2O43745 196 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SNX4O95219 450 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 IL1R1P14778 569 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 FASP25445 335 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TRIM25Q14258 630 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SYT12Q8IV01 421 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 LRRC46Q96FV0 321 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SHCBP1LQ9BZQ2 653 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 HCN3Q9P1Z3 774 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 DNMT3LQ9UJW3 386 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 GTF3C4Q9UKN8 822 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms