RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 NMRK1Q9NWW6 199 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FBXW11Q9UKB1 542 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RPS6KL1Q9Y6S9 549 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 COL4A4P53420 1690 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NCAM2O15394 837 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TBX10O75333 385 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 AMHP03971 560 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KCNA4P22459 653 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 IGFBP6P24592 240 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PDE1BQ01064 536 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 INTS6LQ5JSJ4 861 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RAB41Q5JT25 222 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PRAMEF19Q5SWL8 479 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MAVSQ7Z434 540 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NET1Q7Z628 596 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 OR52K1Q8NGK4 314 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RBBP8Q99708 897 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ULBP1Q9BZM6 244 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 LRRC40Q9H9A6 602 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CNGB3Q9NQW8 809 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KRT82Q9NSB4 513 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TMEM216Q9P0N5 145 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 COPG2Q9UBF2 871 aa16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZCWPW2A0A1B0GU75 182 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 YJEFN3A6XGL0 299 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ERI2A8K979 691 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KCNK1O00180 336 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZNF195O14628 629 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZNF865P0CJ78 1059 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 YBX3P16989 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ARRB2P32121 409 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GARSP41250 739 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ALDH18A1P54886 795 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPM1JQ5JR12 505 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SNX30Q5VWJ9 437 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 BSPRYQ5W0U4 402 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ANO7Q6IWH7 933 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 C10orf107Q8IVU9 208 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NPWQ8N729 165 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZMIZ2Q8NF64 920 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SLC7A14Q8TBB6 771 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RILPQ96NA2 401 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SMOQ99835 787 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM96AQ9H5X1 160 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SNX15Q9NRS6 342 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DONSONQ9NYP3 566 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KLHL8Q9P2G9 620 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CORO1CQ9ULV4 474 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 A6NHS1 94 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CAPN9O14815 690 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KIF1CO43896 1103 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 USP1O94782 785 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MYL4P12829 197 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CYP2B6P20813 491 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CPOXP36551 454 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 LIMK2P53671 638 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 UBAP2LQ14157 1087 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MORN1Q5T089 497 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 BHLHA9Q7RTU4 235 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SCUBE1Q8IWY4 988 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ULK2Q8IYT8 1036 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DPF3Q92784 378 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 HDAC11Q96DB2 347 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MCMBPQ9BTE3 642 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MED10Q9BTT4 135 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GBA3Q9H227 469 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZNF212Q9UDV6 495 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 VANGL2Q9ULK5 521 aa16.46■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MTSS1O43312 755 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TYK2P29597 1187 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CD68P34810 354 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SERPINB8P50452 374 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CDK7P50613 346 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZNF135P52742 658 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TPI1P60174 286 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 KDSRQ06136 332 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 GALNT2Q10471 571 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 OLIG2Q13516 323 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 THOC5Q13769 683 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 RCN2Q14257 317 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CCDC6Q16204 474 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TRMT5Q32P41 509 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CCDC153Q494R4 210 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CES3Q6UWW8 571 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LRRC74BQ6ZQY2 392 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 GPRIN1Q7Z2K8 1008 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CLEC14AQ86T13 490 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 KLHDC8BQ8IXV7 354 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 DCLK2Q8N568 766 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms