RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 BAP1Q92560 729 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 TSC1Q92574 1164 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 MYEOVQ96EZ4 313 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 PRICKLE1Q96MT3 831 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 FCRL3Q96P31 734 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 FAM129BQ96TA1 746 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 CEP83Q9Y592 693 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 LAMA5O15230 3695 aa12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 GCN1Q92616 2671 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-207ENST00000435083 KNTC1P50748 2209 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3DA0A087WVF3 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3IA0A087WXS9 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3EA0A087X179 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3KA0A087X1G2 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 EDDM13A0A1B0GTR0 161 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3FA6NER0 549 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3LB9A6J9 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 GABBR2O75899 941 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 MOCS3O95396 460 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 LTFP02788 710 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 GOT1P17174 413 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 NDUFA8P51970 172 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 NXPH1P58417 271 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 EDRF1Q3B7T1 1238 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 FSCBQ5H9T9 825 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 RNF219Q5W0B1 726 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3CQ6IPX1 549 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TBC1D3Q8IZP1 549 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 AADATQ8N5Z0 425 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 KDM1BQ8NB78 822 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 IRGQQ8WZA9 623 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 AZIN2Q96A70 460 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 MIS12Q9H081 205 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 SLCO3A1Q9UIG8 710 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 KIAA1257Q9ULG3 409 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 ADH1BP00325 375 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 IL1BP01584 269 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 C5AR1P21730 350 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 GLDCP23378 1020 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 ADPRHP54922 357 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 ECT2LQ008S8 904 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 MS4A13Q5J8X5 152 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 OXR1Q8N573 874 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 TFAP2BQ92481 460 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 RPL10LQ96L21 214 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 FCRL2Q96LA5 508 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 SPATA32Q96LK8 384 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
CHRNA1-207ENST00000435083 LOC400499M0QZD8 3231 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 M0QYV0 167 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 BRINP1O60477 761 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 LUC7L3O95232 432 aaKnown RBP12□□□□□ -0.49
CHRNA1-207ENST00000435083 CKMT2P17540 419 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 NNMTP40261 264 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 RXRGP48443 463 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 NUMBP49757 651 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 PPP2CBP62714 309 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 PPP2CAP67775 309 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 ILKQ13418 452 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 DCAF6Q58WW2 860 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 NAPEPLDQ6IQ20 393 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 TMEM270Q6UE05 265 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 KRBA2Q6ZNG9 492 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 GPR155Q7Z3F1 870 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 ZNF605Q86T29 641 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
CHRNA1-207ENST00000435083 SPATS2Q86XZ4 545 aaKnown RBP12□□□□□ -0.49
CHRNA1-207ENST00000435083 APCDD1Q8J025 514 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 LGI2Q8N0V4 545 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 SNIP1Q8TAD8 396 aaKnown RBP12□□□□□ -0.49
CHRNA1-207ENST00000435083 FGF11Q92914 225 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 PTPRN2Q92932 1015 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 SERPINB11Q96P15 392 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 ERVMER34-1Q9H9K5 563 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
CHRNA1-207ENST00000435083 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
CHRNA1-207ENST00000435083 NYNRINQ9P2P1 1898 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-207ENST00000435083 CAPN9O14815 690 aa11.99□□□□□ -0.49
CHRNA1-207ENST00000435083 TBXAS1P24557 533 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-207ENST00000435083 MZF1P28698 734 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-207ENST00000435083 MAT2AP31153 395 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-207ENST00000435083 ACTN2P35609 894 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms