RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 PMF1Q6P1K2 205 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 LRRC69Q6ZNQ3 347 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 SCUBE3Q8IX30 993 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 OR14C36Q8NHC7 312 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 NEUROG2Q9H2A3 272 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 FZD4Q9ULV1 537 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 COQ4Q9Y3A0 265 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 AK5Q9Y6K8 562 aa13.88□□□□□ -0.19
CDC42EP1-204ENST00000434728 FAM237AA0A1B0GTK4 181 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 E9PAM4 449 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 RFPL3O75679 317 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 ADH1BP00325 375 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 IL1BP01584 269 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 IGLV3-27P01718 113 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SRPRAP08240 638 aaKnown RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 CDK4P11802 303 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SLC8A1P32418 973 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 ECT2LQ008S8 904 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SEMG2Q02383 582 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 PITRM1Q5JRX3 1037 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SND1Q7KZF4 910 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 CHSY1Q86X52 802 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 EID2Q8N6I1 236 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 PIP4K2CQ8TBX8 421 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 ADAM32Q8TC27 787 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 CLEC4CQ8WTT0 213 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TTC17Q96AE7 1141 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TRIM62Q9BVG3 475 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 METTL14Q9HCE5 456 aaKnown RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 SERGEFQ9UGK8 458 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 ERVW-1Q9UQF0 538 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TLR6Q9Y2C9 796 aa13.87□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3DA0A087WVF3 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3IA0A087WXS9 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3EA0A087X179 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3KA0A087X1G2 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TARSL2A2RTX5 802 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3FA6NER0 549 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3LB9A6J9 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 PSMA7O14818 248 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 PAPSS1O43252 624 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 LUC7L3O95232 432 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3HP0C7X1 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 FMO5P49326 533 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 CNGA2Q16280 664 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 PKDCCQ504Y2 493 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 ZNF658Q5TYW1 1059 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3GQ6DHY5 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3CQ6IPX1 549 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TBC1D3Q8IZP1 549 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 KDM1BQ8NB78 822 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 SLC35C1Q96A29 364 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 RPL10LQ96L21 214 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 GSDMAQ96QA5 445 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 SLC12A6Q9UHW9 1150 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 TPX2Q9ULW0 747 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 PCDHGA1Q9Y5H4 931 aa13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 NYNRINQ9P2P1 1898 aaKnown RBP13.86□□□□□ -0.19
CDC42EP1-204ENST00000434728 BPTFQ12830 3046 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 A0A087WV48 116 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 CBX4O00257 560 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 RRP8O43159 456 aaKnown RBP13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 C1SP09871 688 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 GOT1P17174 413 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 C5AR1P21730 350 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 NUMBP49757 651 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 CCR5P51681 352 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 DNAJC3Q13217 504 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 NNTQ13423 1086 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 ELAVL3Q14576 367 aaKnown RBP13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
CDC42EP1-204ENST00000434728 DSG4Q86SJ6 1040 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms