RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 PHACTR1Q9C0D0 580 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 CDC42EP4Q9H3Q1 356 aaKnown RBP10.86□□□□□ -0.67
NEFM-202ENST00000433454 PCDHA11Q9Y5I1 949 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 MTCL1Q9Y4B5 1905 aaKnown RBP10.86□□□□□ -0.67
NEFM-202ENST00000433454 MYO7AQ13402 2215 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 F5H5T6 163 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 GOLGA8MH3BSY2 632 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 DFFAO00273 331 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 OPA1O60313 960 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ACSL4O60488 711 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 TMEM63AO94886 807 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
NEFM-202ENST00000433454 GABRR2P28476 465 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ARL4CP56559 192 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 PPM1LQ5SGD2 360 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 TFAP2DQ7Z6R9 452 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 NLRP14Q86W24 1093 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ARHGAP12Q8IWW6 846 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 RNF38Q9H0F5 515 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 EPB41L4BQ9H329 900 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ASAH2Q9NR71 780 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 TMEM248Q9NWD8 314 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 LAMA3Q16787 3333 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 SHROOM3Q8TF72 1996 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 KCNK1O00180 336 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 RIPK2O43353 540 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 STC2O76061 302 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 C1RP00736 705 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 APRTP07741 180 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 NUDT17P0C025 328 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 TACR2P21452 398 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 CDC25CP30307 473 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 IRS1P35568 1242 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 MAGEA6P43360 314 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 WASHC5Q12768 1159 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 CAMK1Q14012 370 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 FAXCQ5TGI0 409 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 NADSYN1Q6IA69 706 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 PDE12Q6L8Q7 609 aaKnown RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 PPP1R21Q6ZMI0 780 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 TMC8Q8IU68 726 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 EXOC4Q96A65 974 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 KLF16Q9BXK1 252 aaPredicted RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 SAYSD1Q9NPB0 183 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 MAN1C1Q9NR34 630 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 NDFIP2Q9NV92 336 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 TCRBV7S3A2A0A539 114 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 E7EVH7 732 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 H3BQF6 201 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 METTL18O95568 372 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 OLFM2O95897 454 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 CORO1AP31146 461 aaKnown RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 FDFT1P37268 417 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 IRAK1P51617 712 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 EIF3BP55884 814 aaKnown RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 ERVK-21P61565 698 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 IFFO1Q0D2I5 559 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 FAM133BQ5BKY9 247 aaKnown RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 AFMIDQ63HM1 303 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 TXNDC8Q6A555 127 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 GAREM2Q75VX8 874 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 LRRC49Q8IUZ0 686 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 PDIK1LQ8N165 341 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 ZNF567Q8N184 647 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 UMODL1-AS1Q8N2C9 162 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 DEPDC1BQ8WUY9 529 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 IGSF8Q969P0 613 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 TSGA13Q96PP4 275 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 VAT1Q99536 393 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 SH3GL2Q99962 352 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 CEP41Q9BYV8 373 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 FRMD8Q9BZ67 464 aaPredicted RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 SMPD4Q9NXE4 827 aa10.85□□□□□ -0.67
NEFM-202ENST00000433454 KLHL8Q9P2G9 620 aaPredicted RBP10.85□□□□□ -0.67
NEFM-202ENST00000433454 MYO18AQ92614 2054 aaKnown RBP10.84□□□□□ -0.67
NEFM-202ENST00000433454 DENND4CQ5VZ89 1909 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 GOLGA6L10A6NI86 522 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 H0YGN5 161 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 EIF3HO15372 352 aaKnown RBP eCLIP10.84□□□□□ -0.67
NEFM-202ENST00000433454 CCL16O15467 120 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 CNTN5O94779 1100 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 ACSL3O95573 720 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 TTC4O95801 387 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 IRF1P10914 325 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 PTPN3P26045 913 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 OAS2P29728 719 aaKnown RBP10.84□□□□□ -0.67
NEFM-202ENST00000433454 MAGEA4P43358 317 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 NDST2P52849 883 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 GPM6BQ13491 265 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 SEMA5AQ13591 1074 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 SLC29A2Q14542 456 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 ALFQ53S48 1182 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 CEP85LQ5SZL2 805 aa10.84□□□□□ -0.67
NEFM-202ENST00000433454 FAM182AQ5T1J6 154 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms