RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TDRD5Q8NAT2 981 aaKnown RBP27.21■■□□□ 1.95
TMEM248-205ENST00000433271 HJURPQ8NCD3 748 aaPredicted RBP27.21■■□□□ 1.95
TMEM248-205ENST00000433271 DOCK8Q8NF50 2099 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 NKD2Q969F2 451 aaPredicted RBP27.21■■□□□ 1.95
TMEM248-205ENST00000433271 KRT12Q99456 494 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 ZFP14Q9HCL3 533 aa27.21■■□□□ 1.95
TMEM248-205ENST00000433271 MCF2LO15068 1137 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 CLDN11O75508 207 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 COILP38432 576 aaPredicted RBP27.2■■□□□ 1.95
TMEM248-205ENST00000433271 FNTAP49354 379 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 SGSHP51688 502 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 VCPP55072 806 aaKnown RBP27.2■■□□□ 1.95
TMEM248-205ENST00000433271 SNX1Q13596 522 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 BYSLQ13895 437 aaKnown RBP27.2■■□□□ 1.95
TMEM248-205ENST00000433271 CIR1Q86X95 450 aaPredicted RBP27.2■■□□□ 1.95
TMEM248-205ENST00000433271 UMODL1-AS1Q8N2C9 162 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 NOA1Q8NC60 698 aaKnown RBP27.2■■□□□ 1.95
TMEM248-205ENST00000433271 BPIFB1Q8TDL5 484 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 OLFM3Q96PB7 478 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 NDFIP2Q9NV92 336 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 DNPEPQ9ULA0 475 aa27.2■■□□□ 1.95
TMEM248-205ENST00000433271 DENND4AQ7Z401 1863 aa27.2■■□□□ 1.94
TMEM248-205ENST00000433271 TYW5A2RUC4 315 aaKnown RBP27.19■■□□□ 1.94
TMEM248-205ENST00000433271 MAPKAPK2P49137 400 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 EIF3EP60228 445 aaKnown RBP27.19■■□□□ 1.94
TMEM248-205ENST00000433271 XRCC4Q13426 336 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 SMAD4Q13485 552 aaKnown RBP27.19■■□□□ 1.94
TMEM248-205ENST00000433271 MPPE1Q53F39 396 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 MPP7Q5T2T1 576 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 TTC27Q6P3X3 843 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 CCDC137Q6PK04 289 aaKnown RBP27.19■■□□□ 1.94
TMEM248-205ENST00000433271 OTOP3Q7RTS5 596 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 PPM1EQ8WY54 764 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 LINC00597Q9H2U6 94 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 A0A1B0GVM2 712 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 GRXCR2A6NFK2 248 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 TCAF2A6NFQ2 919 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 HEPACAM2A8MVW5 462 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 NCAM2O15394 837 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 OR1E1P30953 314 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 TUBB4BP68371 445 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 AFMIDQ63HM1 303 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 TANGO2Q6ICL3 276 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 HLA-CQ95604 372 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 RUNDC3BQ96NL0 473 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 PCYOX1Q9UHG3 505 aa27.19■■□□□ 1.94
TMEM248-205ENST00000433271 DRG1Q9Y295 367 aaKnown RBP27.19■■□□□ 1.94
TMEM248-205ENST00000433271 EFCAB8A8MWE9 144 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 TBL1XO60907 577 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 MAP3K6O95382 1288 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 RBP3P10745 1247 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 NDST2P52849 883 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 PDK1Q15118 436 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 OASLQ15646 514 aaKnown RBP27.18■■□□□ 1.94
TMEM248-205ENST00000433271 ADGRG2Q8IZP9 1017 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 ATL2Q8NHH9 583 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 DDI1Q8WTU0 396 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 OSCP1Q8WVF1 389 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 FEZ2Q9UHY8 353 aaPredicted RBP27.18■■□□□ 1.94
TMEM248-205ENST00000433271 WNT6Q9Y6F9 365 aa27.18■■□□□ 1.94
TMEM248-205ENST00000433271 C5orf42Q9H799 3197 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 CYBBP04839 570 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 MX2P20592 715 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 KCNJ1P48048 391 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 TPGS1Q6ZTW0 290 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 ZC3H18Q86VM9 953 aaKnown RBP27.17■■□□□ 1.94
TMEM248-205ENST00000433271 CCDC105Q8IYK2 499 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 CELF6Q96J87 481 aaKnown RBP27.17■■□□□ 1.94
TMEM248-205ENST00000433271 THG1LQ9NWX6 298 aaKnown RBP27.17■■□□□ 1.94
TMEM248-205ENST00000433271 DUS2Q9NX74 493 aaKnown RBP27.17■■□□□ 1.94
TMEM248-205ENST00000433271 EPS15L1Q9UBC2 864 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 ZNF148Q9UQR1 794 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 XIRP2A4UGR9 3374 aa27.17■■□□□ 1.94
TMEM248-205ENST00000433271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 MBTPS2O43462 519 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 ITGAVP06756 1048 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 GALNT2Q10471 571 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 ZNF177Q13360 481 aaPredicted RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 ARHGAP12Q8IWW6 846 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 TP53INP2Q8IXH6 220 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 CCDC26Q8TAB7 109 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 IRF7Q92985 503 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 ELSPBP1Q96BH3 223 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 NOL6Q9H6R4 1146 aaKnown RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 AMACRQ9UHK6 382 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 TBC1D30Q9Y2I9 924 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 HACD1B0YJ81 288 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 H7C0C1 242 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 PPP1R12AO14974 1030 aaPredicted RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 ATP5OP48047 213 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 LMNB2Q03252 620 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 C6orf118Q5T5N4 469 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 DARS2Q6PI48 645 aaKnown RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 VITQ6UXI7 678 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 MAATS1Q7Z4T9 603 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 SETD3Q86TU7 594 aaPredicted RBP27.16■■□□□ 1.94
TMEM248-205ENST00000433271 TMEM25Q86YD3 366 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 MFSD6LQ8IWD5 586 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 NETO2Q8NC67 525 aa27.16■■□□□ 1.94
TMEM248-205ENST00000433271 P2RY11Q96G91 374 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms