RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CTHP32929 405 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 GJA4P35212 333 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ETFBP38117 255 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 TFDP2Q14188 446 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ALFQ53S48 1182 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ANKRD20A8PQ5CZ79 823 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 TMCO3Q6UWJ1 677 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ZNF783Q6ZMS7 281 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 SPOCD1Q6ZMY3 1216 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 NLRP14Q86W24 1093 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 RALGPS2Q86X27 583 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 TMEM25Q86YD3 366 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 WFIKKN2Q8TEU8 576 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ALG3Q92685 438 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 C16orf45Q96MC5 204 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 UHRF1Q96T88 793 aaPredicted RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 ARHGEF4Q9NR80 690 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
CHD4-202ENST00000430771 PLK2Q9NYY3 685 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 MPP6Q9NZW5 540 aa11.32□□□□□ -0.6
CHD4-202ENST00000430771 MYOFQ9NZM1 2061 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 hCG_1818297A0A087WSY0 165 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 SPECC1L-ADORA2AF8WAN1 911 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 KCNK3O14649 394 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ENC1O14682 589 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 DCLK1O15075 740 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 RAMP2O60895 175 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 CNTN5O94779 1100 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ATP1A1P05023 1023 aaKnown RBP11.31□□□□□ -0.6
CHD4-202ENST00000430771 ERCC2P18074 760 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 TGM2P21980 687 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 OR1E1P30953 314 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 CDKN2BP42772 138 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 DGKGP49619 791 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 PEX5P50542 639 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 IRAK1P51617 712 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ETF1P62495 437 aaKnown RBP11.31□□□□□ -0.6
CHD4-202ENST00000430771 PRKCQQ04759 706 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 SLC12A1Q13621 1099 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
CHD4-202ENST00000430771 NYAP1Q6ZVC0 841 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ETFBKMTQ8IXQ9 262 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 AHI1Q8N157 1196 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 MYEOVQ96EZ4 313 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ARHGEF3Q9NR81 526 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 HEBP1Q9NRV9 189 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
CHD4-202ENST00000430771 DEC1Q9P2X7 70 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 EFR3BQ9Y2G0 817 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
CHD4-202ENST00000430771 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 OTOL1A6NHN0 477 aaPredicted RBP11.3□□□□□ -0.6
CHD4-202ENST00000430771 C3orf70A6NLC5 250 aaPredicted RBP11.3□□□□□ -0.6
CHD4-202ENST00000430771 MAN2B1O00754 1011 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 TULP3O75386 442 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 APODP05090 189 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 PABPC1P11940 636 aaKnown RBP11.3□□□□□ -0.6
CHD4-202ENST00000430771 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
CHD4-202ENST00000430771 AMPD1P23109 780 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 CASQ1P31415 396 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 KDSRQ06136 332 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 DMC1Q14565 340 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 E2F5Q15329 346 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 TAZQ16635 292 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 PARP15Q460N3 678 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 KAZNQ674X7 775 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 NCBP2-AS2Q69YL0 99 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 SLC9A4Q6AI14 798 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
CHD4-202ENST00000430771 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 C12orf40Q86WS4 652 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHD4-202ENST00000430771 NAT16Q8N8M0 369 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 PCDH19Q8TAB3 1148 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
CHD4-202ENST00000430771 SHDQ96IW2 340 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms