RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 PLCB1Q9NQ66 1216 aa16.82■□□□□ 0.28
PTPRA-206ENST00000430705 ASNSD1Q9NWL6 643 aa16.82■□□□□ 0.28
PTPRA-206ENST00000430705 SLCO3A1Q9UIG8 710 aa16.82■□□□□ 0.28
PTPRA-206ENST00000430705 NEUROG3Q9Y4Z2 214 aa16.82■□□□□ 0.28
PTPRA-206ENST00000430705 DSPP15924 2871 aaKnown RBP16.82■□□□□ 0.28
PTPRA-206ENST00000430705 NBEAQ8NFP9 2946 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 TYW5A2RUC4 315 aaKnown RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 I6L893 689 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 MID1O15344 667 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 VAV1P15498 845 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 MZF1P28698 734 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 GGCXP38435 758 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 CSNK1EP49674 416 aaKnown RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 KIF19Q2TAC6 998 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 HLA-BQ31612 363 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 CCAR2Q8N163 923 aaKnown RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 CHCHD4Q8N4Q1 142 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 KDF1Q8NAX2 398 aaPredicted RBP16.81■□□□□ 0.28
PTPRA-206ENST00000430705 MLKLQ8NB16 471 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 IGSF8Q969P0 613 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 FAM129BQ96TA1 746 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 TRIM62Q9BVG3 475 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 GAREM1Q9H706 876 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 EBF2Q9HAK2 575 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 SUN2Q9UH99 717 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 DNAJC12Q9UKB3 198 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 PCOLCE2Q9UKZ9 415 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 ZMIZ1Q9ULJ6 1067 aa16.81■□□□□ 0.28
PTPRA-206ENST00000430705 SYNJ2BP-COX16A0A087WUM0 186 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 H0Y626 953 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 HSF2BPO75031 334 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 DAB1O75553 588 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 GLI1P08151 1106 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 SRPRAP08240 638 aaKnown RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 ZNF883P0CG24 379 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 MATKP42679 507 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 MTIF2P46199 727 aaKnown RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 METAP1P53582 386 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 KCNMA1Q12791 1236 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 TRIP6Q15654 476 aaKnown RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 CST6Q15828 149 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 TTC31Q49AM3 519 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 ARTNQ5T4W7 220 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 FBXL22Q6P050 247 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 DBX2Q6ZNG2 339 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 USP30Q70CQ3 517 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 AADATQ8N5Z0 425 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 PTPRN2Q92932 1015 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 ALG14Q96F25 216 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 RPL10LQ96L21 214 aaKnown RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 SGK2Q9HBY8 427 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 OSGEPQ9NPF4 335 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 DDIT4Q9NX09 232 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 COX16Q9P0S2 106 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 KIAA1522Q9P206 1035 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-206ENST00000430705 BTBD3Q9Y2F9 522 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 SNX11Q9Y5W9 270 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 PKD1L2Q7Z442 2459 aa16.8■□□□□ 0.28
PTPRA-206ENST00000430705 A0A1W2PP55 124 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FAM170AA1A519 330 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FAM221BA6H8Z2 402 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 F5H5T6 163 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FSBPO95073 299 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 CER1O95813 267 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FTH1P19P0C7X4 201 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 PDGFRAP16234 1089 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 AFF3P51826 1226 aaKnown RBP16.79■□□□□ 0.28
PTPRA-206ENST00000430705 ST8SIA6P61647 398 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 ECT2LQ008S8 904 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 C11orf57Q6ZUT1 292 aaPredicted RBP16.79■□□□□ 0.28
PTPRA-206ENST00000430705 SLC26A9Q7LBE3 791 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 C14orf80Q86SX3 495 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
PTPRA-206ENST00000430705 STK40Q8N2I9 435 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 PNPLA1Q8N8W4 532 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 ATP6V0D2Q8N8Y2 350 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FRS2Q8WU20 508 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 TM7SF3Q9NS93 570 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 TOR4AQ9NXH8 423 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 ADAMTS1Q9UHI8 967 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 MSRB2Q9Y3D2 182 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 FHOD1Q9Y613 1164 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 CELSR3Q9NYQ7 3312 aa16.79■□□□□ 0.28
PTPRA-206ENST00000430705 PLXNB3Q9ULL4 1909 aa16.78■□□□□ 0.28
PTPRA-206ENST00000430705 EDDM13A0A1B0GTR0 161 aa16.78■□□□□ 0.28
PTPRA-206ENST00000430705 A0A1B0GVM2 712 aa16.78■□□□□ 0.28
PTPRA-206ENST00000430705 TARSL2A2RTX5 802 aaKnown RBP16.78■□□□□ 0.28
PTPRA-206ENST00000430705 TCAF2A6NFQ2 919 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms